Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0143 ATGGTAACAATCTTAGGTACTCATACAGTGATCCCAAAAGAAGAAACTCCAAAGGGTCTTCTATGGCTATCAGACAACGACCAACTCTGGCGATGGAGTCATACACCTTCAATCTACGTTTACAAGTCAAAACAGAACAACAACACTGTCCTCGTTGAGAGAATGCGAGATTCTCTCAGCGAGATTCTCGTTCATTACTATCCGTTGGCCGGGAGGCTCAACTGGACGGCCGGCGGTCGTTTGGAACTCGATTGCAACGCAAAGGGAGCCTTGCTTCTCGAGGCCGAATCCACGAAATCAATGGCGGAATACGGAGACTTCACACCAAACGAACCCGGCATCAAAGAACTCATCCCAGCCGTTGATTACTCTCGTCAAATGAACGAGCTTCCTTTGTTCTTGGCACAGGTGACGAAGTTCCACGGCGGCAATGGCGGTTTCGCAGTCGGAATCCTCTGGTCTCATCCGTTAGGCGACGGCCTGGCCGCCATTCGCTTCATCAACTCATGGGCGAAGCTCACTCGAGGAGCCAAGTTAGATCCAAGTGAGCTTCCGTTTCTCGACCGAACGGCGCTCAAATCAACTGAGCTATTAACTCCACCCCGGTTCGACCACCGGGAGTTCAAGCCTCTCCCGCTCATCCTCGGAAGAACCGACAATATCGAAGAGCAAAAGAAGAAGACGACCTTCGCGTTGTTAAAACTCACATCAGAACACGTCCAGAAGCTCAAAAAGAATGCAATCGTAACCGCAAACGGAAACGGTAACGGTAACGGTCCTCATAACGAATCTCAGAGACCGTACAGCAGATTCGAAGTTATCAGCGCGCATATATGGAGATGCGCTTGCAAAGCTCGTAATCTTAAAGAGAATCAACCAACGGTGGTTAAATTCAACGTCGATATACGAAACAGAATGAATCCGCCACTTCCTCAAAACTACTTCGGAAACGCGTTGGGTCCGACGGTTACGCCAACTTGCTACCTCAAAGAAATCACCACTCAACCGATTAGTTACGCGGCGCAGAAAATAAGAGAAGCCGTTAAGAAAGTGTCGAATCACGAGTTTGTTAAATCACAAATGGATTACGTGGCAGGGTTTGAAAACCGTTGGGATCTGATTAGGACACCGTACTTGGAGAAAGGTGAGTATAGAGCTGATGTGCCTTTCTTTGGGAATCCTAATATTATACTTGGAAGTTGGATGAGTATGCCGTTTTATGAAGCTGATTTTGGGTTGGGGAAACCGTTTTATTTTGGTCCTGGTGGTGTGTGCCCTTATGATAGAGCTGTTATTGCTCTAATGCCAGATGAAGATGGTGATAATGGATATGCTGTGGTGGTGTACATGCATTTTCAGGTGGAACACATGAAAGATTTCATCAAGTACTTTTGGGAAGATATTTGA 1407 0.4705 MVTILGTHTVIPKEETPKGLLWLSDNDQLWRWSHTPSIYVYKSKQNNNTVLVERMRDSLSEILVHYYPLAGRLNWTAGGRLELDCNAKGALLLEAESTKSMAEYGDFTPNEPGIKELIPAVDYSRQMNELPLFLAQVTKFHGGNGGFAVGILWSHPLGDGLAAIRFINSWAKLTRGAKLDPSELPFLDRTALKSTELLTPPRFDHREFKPLPLILGRTDNIEEQKKKTTFALLKLTSEHVQKLKKNAIVTANGNGNGNGPHNESQRPYSRFEVISAHIWRCACKARNLKENQPTVVKFNVDIRNRMNPPLPQNYFGNALGPTVTPTCYLKEITTQPISYAAQKIREAVKKVSNHEFVKSQMDYVAGFENRWDLIRTPYLEKGEYRADVPFFGNPNIILGSWMSMPFYEADFGLGKPFYFGPGGVCPYDRAVIALMPDEDGDNGYAVVVYMHFQVEHMKDFIKYFWEDI* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0143 468 Pfam Transferase family 1 462 - -
Ahy13g0143 468 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 468 - -
Ahy13g0143 468 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 468 - -
Ahy13g0143 468 Gene3D - 217 467 IPR023213 -
Ahy13g0143 468 Gene3D - 1 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0143 Ahy-Chr13 1590838 1592494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0143 2 466 Monolignol Biosynthesis Gene Families AT5G48930 33.405 1.19e-81 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0143 K13065 - gmx:100779814 508.834