Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0135 ATGCCGCAAGATTCCTCCGATCAAGACCTCGACGACGCCGATTCCGAGTTCGTTGAGGTTGACCCAACCGGTCGCTATGGTCGGTACAAGGAAGTTTTAGGGAAGGGAGCTTTCAAGAAAGTATATCGAGCATTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGATTAAGGTGGCGGATCTGCTGCGTAACTCGGAAGATTTGGAGAGACTTTATTCCGAGGTTCATCTGCTCAAGACGTTGAAGCACAAGAATATAATTAAGTTCTACAATTCGTGGGTTGACACCAAGAATGAGAACATCAACTTCATTACCGAGATTTTCACCTCGGGGACATTACGCCAATATCGGAAGAAACATAAGCATGTTGATTTGAGAGCTTTGAAGAAATGGTCTAGGCAGATTTTGGAGGGTCTTTTATATCTTCACAGTCATAATCCTCCAGTTATACATCGAGACCTTAAGTGTGACAACATTTTTGTCAACGGGAATCAAGGGGAGGTAAAAATTGGAGATTTAGGGTTGGCAGCTATTCTTCAACAGGCCCAAGCAGCTCACAGTGTCATAGGTACCCCAGAGTTCATGGCCCCAGAACTTTATGAAGAAGAGTACAACGAGCTTGTTGATATCTACGCTTTTGGAATGTGCTTGCTAGAGTTGGTAACCTTTGAGTATCCATACATTGAATGTTCCAATGCTGCTCAAATATACAAGAAAGTGACATCGGGAATAAAGCCAGCATCATTGGCAAAAGTGGCAGATCAAGAAGTTAAGGCATTCATTGAAAAGTGTATCGCTAATGTTTCAGAACGGTTGCCTGCAAAGGCTCTCTTGATGGATCCCTTCCTTCAGTCTGACTCTGATAGTGAAAGTGTAGGTCGTTCTTCAAGGTCTGGAACCCATCATTCAGGAAATAGTTCTAATAATCAAGCAATTGGAAAAAGTGTTCAGGATGTTTCTAGTGATTCAAATAGGGAATTCACAGTGGAAGGTCAGAGGAAGGATATTGATACAATATTTTTAAAACTGCGAATAGCAGACTCCTCAGGTCATGTTCGGAATATCCACTTCCCTTTCGATATTGGAGCGGACACTGCAATCTCTGTTGCTAGTGAAATGGTCGAGGAGTTGGAACTTACTGATCAAGATGTCACAACTATTGCTGAGACAATTGACTCTGAAATTCGATCTCTCATTCCTGGTTGGAACCCCAGTGAAACTCCTGCTACTAATGTTCCTGAAGATTCAGCAGTTTCAGATGGCTGTACCTCTGCTGAAACTAGGAGTGTGTCTTCTCCTACAGAAAATGATTCAACCACTCCTTCTAGCAATCTTGCATTAGAAATACTACGTTCAGGTCGTAAGTACTGGTCAGACTCACCTAAGGGAGTTTGTGGAAACCCTTTATCTAGGCATGGTTCTTCAAACTTGTCCCATATAGGTGATGCAAATGCTGAGAAAGGAAGCTTGACTGCAAATGGTGCTATTTCAGATGAACTTGAGCCTGACCAGGTTACCTGTGTCGGTGCTTACTGTGCAGAGAAGGAATGTGATAGTACTGGTGATTCCCCCTCCACCGAGAGAACTATTACCTCTGGATATTTGGAAGAAACCAGTGATGCGTCATCTCTGGAAAAAATACCGGAAAGTTTGGAAGTTTCTGAAATAGATGCCAGTAAAATAGCCCTGCAACTTGAGAGTTTGTTGACAAATCAAAAAGAGGAGCTGGAAGAACTAAAGAGGAAGCAAAAATTAGCTGTCTCTAATCTTTTGAAGGAACTTTCACCAGAAATTTGTAAGAAGGTCCTAAATATATGCAACCTGCAGATGCTTGACTATGAAAATTTATAG 1857 0.4206 MPQDSSDQDLDDADSEFVEVDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQIKVADLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQAQAAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYIECSNAAQIYKKVTSGIKPASLAKVADQEVKAFIEKCIANVSERLPAKALLMDPFLQSDSDSESVGRSSRSGTHHSGNSSNNQAIGKSVQDVSSDSNREFTVEGQRKDIDTIFLKLRIADSSGHVRNIHFPFDIGADTAISVASEMVEELELTDQDVTTIAETIDSEIRSLIPGWNPSETPATNVPEDSAVSDGCTSAETRSVSSPTENDSTTPSSNLALEILRSGRKYWSDSPKGVCGNPLSRHGSSNLSHIGDANAEKGSLTANGAISDELEPDQVTCVGAYCAEKECDSTGDSPSTERTITSGYLEETSDASSLEKIPESLEVSEIDASKIALQLESLLTNQKEELEELKRKQKLAVSNLLKELSPEICKKVLNICNLQMLDYENL* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0135 618 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 343 397 IPR024678 GO:0004674|GO:0005524
Ahy13g0135 618 Coils Coil 564 595 - -
Ahy13g0135 618 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Ahy13g0135 618 Gene3D - 339 426 - -
Ahy13g0135 618 MobiDBLite consensus disorder prediction 287 328 - -
Ahy13g0135 618 MobiDBLite consensus disorder prediction 287 330 - -
Ahy13g0135 618 MobiDBLite consensus disorder prediction 405 446 - -
Ahy13g0135 618 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0135 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 613 - -
Ahy13g0135 618 CDD STKc_WNK 25 285 - -
Ahy13g0135 618 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Ahy13g0135 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Ahy13g0135 618 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Ahy13g0135 618 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 6 613 - -
Ahy13g0135 618 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0135 618 MobiDBLite consensus disorder prediction 400 446 - -
Ahy13g0135 618 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0135 Ahy-Chr13 1522992 1526533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0135 15 404 MAP Kinase Kinase Kinase AT3G22420 54.795 1.81e-168 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Ahy13g0135 Pkinase 2.70E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0135 K08867 - gmx:100301899 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0135 13 1522992 1526533 Ahy13g0135 13 1522992 1526533 ECH