Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0132 ATGGCTACTGCGACTTCTCCCACTGTTCCTATGGAAGAAGAAGATGACGTCACAGCCACAGCCACAGCCACAAACCAAAACCTTCAAACTCATCAAAACGGCGTCGTTCCTTCTTCTCCCATGCTTCCCGTTTCCGACGACAAAATCCTTCTCCCTGTTGAGGTCTGCTTGAAGCCTTCCAGCACTGCTTCTATCCGTGACGTTCGTTCCGCTATCGAAAGGATGCTTGAGAAGAGGAGTTTGAGCTATTGTGATGGCCCCATTCCTCTCCCCATGGACGAGCCCTTTCTCGCCGACAACGTCCACAGAATTTGTATTTGTGACACAGATGAAGGGATGCACAATGATAATGTTCTTTTGTTCTGGCAAGTCAAGCCAGTTGTCCATGTCTTTCAGCTTAGCGAGGAAGGACCATGTGAGGATATAAGCTCTGATGGCCAGAGTTCCAACTTCAATGAATGGATTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGTTTAATATTCGAATCTGGTCTAAAGCAAAGGTTGTTACGTTATGCAGCTAGTGCTTTGCTCTTTACTGAAAAAGGTGTTGATCCATTCCTTGTTTCATGGAATCGCATAATTCTTCTACATGGACCCCCTGGGACTGGAAAGACTTCGTTGTGTAAAGCATTAGCTCAGAAATTATCGATTCGATTCAATTCAAGATTCCCACAGTGCCAGCTTATTGAAGTGAATGCACATTCTTTATTCAGTAAATGGTTTTCTGAAAGTGGCAAGCTGGTTGCGAAACTTTTCCAAAAGATTCAAGAAATGGTAGAGGAAGAAAGCAATCTAGTATTTGTTTTGATTGATGAAGTCGAAAGCCTTGCTGCGGCCAGGAAAGCTGCTATATCCGGTTCAGAACCTTCAGATTCTATTCGGGTTGTAAATGCATTACTAACTCAGATTGACAAGTTAAAATCATCTCCAAATGTGATAATTCTAACCACATCCAACATAACTGCTGCTATTGATATTGCTTTTGTCGACCGAGCTGATATTAAAGCATATATTGGTCCCCCGACACTTCAAGCTCGATATGAAATATTAAGGTCTTGCTTGCAGGAATTGATGCGTACGGGGATCTTAACTAGTTTACAGGGTTGTGATAACACCACACTTCCAAGTTATGCCAGTGCAAAGGATAGGTCGAGTGCACCGGATTTTCATGAGGTTACTGCATCCATGCAACTATGCAACCAACTTCTTGAAACTGCCAAGGCCTGTGAGGGAATGAGTGGGAGGTCCTTGAGAAAGCTTCCATTTTTGGCACATGCTGCCCTTGCCAATCCTTTCCATTGCAACCCTATTAAGTTCTTATGTACAATGATTGAAACGGCAAAGAGGGAGCGTTCTGAGCTTCCTGACTAA 1401 0.4354 MATATSPTVPMEEEDDVTATATATNQNLQTHQNGVVPSSPMLPVSDDKILLPVEVCLKPSSTASIRDVRSAIERMLEKRSLSYCDGPIPLPMDEPFLADNVHRICICDTDEGMHNDNVLLFWQVKPVVHVFQLSEEGPCEDISSDGQSSNFNEWILPAKEFDGMWESLIFESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARKAAISGSEPSDSIRVVNALLTQIDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYIGPPTLQARYEILRSCLQELMRTGILTSLQGCDNTTLPSYASAKDRSSAPDFHEVTASMQLCNQLLETAKACEGMSGRSLRKLPFLAHAALANPFHCNPIKFLCTMIETAKRERSELPD* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0132 466 ProSitePatterns AAA-protein family signature. 322 341 IPR003960 GO:0005524|GO:0016887
Ahy13g0132 466 SMART AAA_5 200 352 IPR003593 -
Ahy13g0132 466 Gene3D - 143 367 IPR027417 -
Ahy13g0132 466 Pfam ATPase family associated with various cellular activities (AAA) 204 349 IPR003959 GO:0005524|GO:0016887
Ahy13g0132 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 434 IPR027417 -
Ahy13g0132 466 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 42 463 IPR044539 -
Ahy13g0132 466 CDD AAA 202 350 - -
Ahy13g0132 466 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 204 222 IPR001270 GO:0005524
Ahy13g0132 466 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 318 332 IPR001270 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0132 Ahy-Chr13 1485143 1490222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0132 204 377 Calmodulin-binding Proteins AT3G56690 29.545 1.07e-12 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0132 13 1485143 1490222 Ahy13g0132 13 1485143 1490222 ECH