Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0130 ATGGAATCTGGTGGAGCTAATAACTTCTACTCAGTTGATGATGAGTTCAGATTGGATACCAAGTGGCTTATTGATCCTAAGCATCTCTATGTTGGGCCACGGATTGGTGAAGGGGCTCATGCCAAAGTCTATGAGGGAAAATACAAAGACCAGGCTGTTGCTATCAAAATTCTACACAAAGGAGAGACTCCGGAAGATATCGCCAAGCGAGAAGGCCGGTTCGCGAGGGAGGTCGCCATGTTGTCTAGAGTGCAGCATAAGAACTTGGTGAAGTTTATTGGTGCATGCAAGGAGCCTGTGATGGTGATAGTCACTGAGCTCTTGTTGGGAGGAACACTGCGGAAGTATTTGCTTAACATGCGACCGAAATGTTTGGAAAGACATCTTGCCATTGGTTTTGCGCTTGATATTGCGCGCGCCATGGAGTGCCTGCATTCCCATGGGATCATCCACCGTGATCTTAAACCCGATAACTTGCTTTTGACCAAAGACCAAAAAATAGTCAAGCTTGCAGATTTCGGCTTAGCAAGAGAAGAATCATTAACTGAGATGATGACTGCAGAAACAGGAACTTACCGTTGGATGGCTCCAGAGTTGTATAGCACTGTCACACTGAGGCAGGGTGAGAAGAAGCATTACAATCATAAAGTCGATGCGTATAGCTTCGCAATCGTGTTGTGGGAGCTCATACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTTCAGGCAGCATATGCTGCAGCCTTCAAGAATGTAAGACCAAGTGCAGAGAATCTTCCTGAGCAATTGGCCGAAATCCTAACTTTGTGCTGGCAAGAGGATCCAAACGCCCGACCCAACTTCACTCGGATAATCCAGATGCTCCTGAATTATCTTTACACCATTGCGCCGCCAGAACCCATGATTCCTTCAAGAATATTCACTTCCGAGAACACTGTCTTGCCACCAGAGTCACCCGGTACTAGGTCCTTGATGGCAAAACGCGATGACACTGGGGATACACCAAGAGCAACAGATGAAACCAGGCTTAATAGTTTTCTTTGCTGCTTTAGCCAGTGTTATTAA 1068 0.4616 MESGGANNFYSVDDEFRLDTKWLIDPKHLYVGPRIGEGAHAKVYEGKYKDQAVAIKILHKGETPEDIAKREGRFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLERHLAIGFALDIARAMECLHSHGIIHRDLKPDNLLLTKDQKIVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEQLAEILTLCWQEDPNARPNFTRIIQMLLNYLYTIAPPEPMIPSRIFTSENTVLPPESPGTRSLMAKRDDTGDTPRATDETRLNSFLCCFSQCY* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0130 355 ProSitePatterns Protein kinases ATP-binding region signature. 35 56 IPR017441 GO:0005524
Ahy13g0130 355 PANTHER SERINE-THREONINE PROTEIN KINASE 5 330 - -
Ahy13g0130 355 SMART serkin_6 29 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0130 355 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 5 330 - -
Ahy13g0130 355 MobiDBLite consensus disorder prediction 316 339 - -
Ahy13g0130 355 CDD STKc_MAP3K-like 35 289 - -
Ahy13g0130 355 MobiDBLite consensus disorder prediction 324 338 - -
Ahy13g0130 355 PRINTS Tyrosine kinase catalytic domain signature 260 282 IPR001245 GO:0004672|GO:0006468
Ahy13g0130 355 PRINTS Tyrosine kinase catalytic domain signature 217 239 IPR001245 GO:0004672|GO:0006468
Ahy13g0130 355 PRINTS Tyrosine kinase catalytic domain signature 105 118 IPR001245 GO:0004672|GO:0006468
Ahy13g0130 355 PRINTS Tyrosine kinase catalytic domain signature 143 161 IPR001245 GO:0004672|GO:0006468
Ahy13g0130 355 Gene3D Phosphorylase Kinase; domain 1 17 108 - -
Ahy13g0130 355 Pfam Protein tyrosine and serine/threonine kinase 32 289 IPR001245 GO:0004672|GO:0006468
Ahy13g0130 355 ProSiteProfiles Protein kinase domain profile. 29 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0130 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Ahy13g0130 355 SUPERFAMILY Protein kinase-like (PK-like) 20 317 IPR011009 -
Ahy13g0130 355 Gene3D Transferase(Phosphotransferase) domain 1 110 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0130 Ahy-Chr13 1458616 1461482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0130 16 355 MAP Kinase Kinase Kinase AT5G50180 78.824 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Ahy13g0130 PK_Tyr_Ser-Thr 7.00E-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0130 - - gmx:100796593 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0130 13 1458616 1461482 Ahy13g0130 13 1458616 1461482 ECH