Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0124 ATGGGTCGGCATTCTTGTTGTTTAAAGCAAAAACTAAGGAAAGGTTTATGGTCCCCTGAAGAAGATGAGAAGCTCTTCAACTACATTTCTAGGTTTGGTGTTGGTTGCTGGAGTTCAGTTCCCAAACAAGCTGGGCTACAAAGATGTGGAAAGAGTTGCAGACTAAGATGGATAAATTATTTGAGGCCTGATTTGAAGAGAGGCATGTTTTCTCAACAAGAGGAGGATCTTATAATCACTCTCCATGAGGTTCTTGGAAATAGGTGGGCACAGATTGCGGCACAGTTGCCAGGAAGAACAGATAATGAGATAAAGAATTTCTGGAATTCATGTCTGAAGAAGAAGCTAATGAAGCAAGGGATTGATCCAACTACACACAAGCCTCTTCATAATCATGAAGACAAAGATAATGATACTATTATTAATAATAATAATAATAATACAACACAAGCAGCATGTTCTTCTTCTTCTTCCATGGCAATGTTAGATGGAATTATTGGAGGAGTTTCATCATCATTATCATCATCATCATTATTATTAGACCCTTTGACATGCTTGGATTTTTCTCATCATCATGAAAACTATGGATTATTATTCTCTTCAATGCCAAGCCTAGACATGAATAATAATAATAATAATAATGCATTGCTCTCATCAACATCATCATGGGATTGTTGTAGCAATGAAGAGGAGAACAAGTTAGAATCTTTGTTTCAGTTTCATCATCAACTCAAATCTGAGGAGGAATTCAATACAAATTATAATAATAATGTGCAGCAGAATTCAATGCAAGAAGATTTCATGAGCAGCTATAATAATTTAAGGTCACTCTCATCAGAAGATCTATCAGCAGCAGCAGCAGCAGTAGCAGGACCAAATTTTGATGTATTCCACCAGATATGA 903 0.361 MGRHSCCLKQKLRKGLWSPEEDEKLFNYISRFGVGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIITLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQGIDPTTHKPLHNHEDKDNDTIINNNNNNTTQAACSSSSSMAMLDGIIGGVSSSLSSSSLLLDPLTCLDFSHHHENYGLLFSSMPSLDMNNNNNNNALLSSTSSWDCCSNEEENKLESLFQFHHQLKSEEEFNTNYNNNVQQNSMQEDFMSSYNNLRSLSSEDLSAAAAAVAGPNFDVFHQI* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0124 300 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Ahy13g0124 300 CDD SANT 70 109 IPR001005 -
Ahy13g0124 300 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy13g0124 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Ahy13g0124 300 CDD SANT 17 61 IPR001005 -
Ahy13g0124 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Ahy13g0124 300 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy13g0124 300 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy13g0124 300 SMART sant 13 63 IPR001005 -
Ahy13g0124 300 SMART sant 66 114 IPR001005 -
Ahy13g0124 300 PANTHER MYB DOMAIN PROTEIN 55 1 161 - -
Ahy13g0124 300 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy13g0124 300 Gene3D - 68 146 - -
Ahy13g0124 300 Gene3D - 11 67 - -
Ahy13g0124 300 PANTHER MYB-RELATED PROTEIN HV33-LIKE 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0124 Ahy-Chr13 1396395 1398401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0124 1 138 MYB Transcription Factor Family AT4G01680 81.159 2.51e-81 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy13g0124 Myb_DNA-binding 7.10E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0124 K09422 - tcc:18603988 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0124 13 1396395 1398401 Ahy13g0124 13 1396395 1398401 ECH