Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0119 ATGAACATAAAAAAGGGTGAGATTGAGAAGGTGAATTGGAAGAATTTGAGTTACAGTGAATTTGTGGAGAGATTCATGCAAAAAAACCAACCTTTGTTGCTCAATGGATTCTCGGAACATCACAATTGGAGAGCTTCAGTTGATTGGGTCACCCCTCTTGGCCACCCCAATTTTCAATTTTTCTCCACAAATTTTGGGGATTCCAAAGTTCAGGTTGCAGATTGTGACACAAGAGAGTTCACCGATCAGAAAAGGGAGGAGATGCTGGTTTCGGAGTTTATAGGACGTTGCCTTCAAGATGTTGAAGGTTCTGCAGTCCAATGTAGCAATAGTCACTCTGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCAGAATATGTAGCTTATAAAACTCCAATGTTCTTTTGTGATGATTGGCTTAACCTGTATCTTGACAACTACAGAATGCATACTGATTCTGACACATACCAAGAAAATAACGAAATATGTTGCTCTGACTATCGTTTCGTATACATGGGAGTTAAAGGATCTTGGACTCCTCTTCATGCCAATGTTTTCCGGTCATATAGCTGGTCGGCAAATGTTTGCGGAAAAAAGAGATGGCTATTTCTAGATCCTTCCCAACATCATCTTGTATTTGACAGGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTATCTGACTCAAAATTTCCTGGTTTCAAAAAGGCTATCTGGTTAGAACGCATGCAAGAAGCAGGTGAAATTATATTTGTTCCCAGTGGATGGTACCATCAAGTTCATAATTTGGAGGATACAATATCTATAAACCACAACTGGTTCAATGCGAATAACCTTTCATGGGTGTGGAATTTACTTTTGAGGGACTACAATGAGGCCAACGAATACATAGAAGACATCAAGGATGTATGTGAGGATTTCGAAGGTCTTTGCCAGCGCAATCTTGCTGCTAACACGGGGATGAACTTTTATGACTTCTTTACTTTCATATCACGCTTCACCTTGGCCAACATTGTCTTGCTTTGTTATATAAATGGAAGACATGGAAATATCACTCAAATCTCATCAACAATAGCTCAGCATTTATTGATGAATCTTGGATCCATAAGGAAGGTTGCATCGGAGATGAAAGACAGGCATGCTCTAAAAGGAAATCAGGATCGCGCTGTGGACATTATAGAAACACTTGAAGATCCTAGCTTTTGCAAATTGTGCATGGATATAGGAAGAACATATGCAATGATACATGAAGAGTCTCATTTGTCCTTTGATTTCGAGAGAGCTTCAGCTGGTGAAATAGTGGATCTCACTGTTTTGAAAGCATACACTTCATCTCAGTTCTACACACCTGAAGATCTTGTTGAATTTATAGACAATGCTGTTGCAGAACATGGTGACTGTTACATCAACTCATCTGCAATATGA 1440 0.3875 MNIKKGEIEKVNWKNLSYSEFVERFMQKNQPLLLNGFSEHHNWRASVDWVTPLGHPNFQFFSTNFGDSKVQVADCDTREFTDQKREEMLVSEFIGRCLQDVEGSAVQCSNSHSVPYLKDWHFVKEYPEYVAYKTPMFFCDDWLNLYLDNYRMHTDSDTYQENNEICCSDYRFVYMGVKGSWTPLHANVFRSYSWSANVCGKKRWLFLDPSQHHLVFDRNMKNCVYNIFDEVSDSKFPGFKKAIWLERMQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNANNLSWVWNLLLRDYNEANEYIEDIKDVCEDFEGLCQRNLAANTGMNFYDFFTFISRFTLANIVLLCYINGRHGNITQISSTIAQHLLMNLGSIRKVASEMKDRHALKGNQDRAVDIIETLEDPSFCKLCMDIGRTYAMIHEESHLSFDFERASAGEIVDLTVLKAYTSSQFYTPEDLVEFIDNAVAEHGDCYINSSAI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0119 479 SUPERFAMILY Clavaminate synthase-like 17 302 - -
Ahy13g0119 479 Gene3D Cupin 2 279 - -
Ahy13g0119 479 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 5 468 - -
Ahy13g0119 479 ProSiteProfiles JmjC domain profile. 123 295 IPR003347 -
Ahy13g0119 479 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 5 468 - -
Ahy13g0119 479 SMART cupin_9 115 295 IPR003347 -
Ahy13g0119 479 Pfam Cupin-like domain 20 279 IPR041667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0119 Ahy-Chr13 1299026 1303660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0119 6 287 Glycosyltransferase AT1G78280 21.212 1.67e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Ahy13g0119 Cupin_8 1.70E-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0119 - - aip:107632417 915.605