Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0100 ATGGAATCCAGTTCGTTCATAATGATGCCAAGGTCTAAATGCCATAAGAACTTTAAAATGAAGAGGAACCCTCGTAAGGTCAAATGGACCAAGGCATATCGAAGAGTGCATAGAAAGGATATGACTCAGGATTCAACGTTTGAATTCGAGAGGATGCGGAACAAATTGGAGAGATATGACAGGAACCTTATTGAAAATGTGTTTAAGGCCATTCCTAAGATTGATAAAATCAGAGTCATCAAAGAGGAGAGACACCATAAGAATAGGTCCTTGCTTGAATCTTCTATAGGTTCCATAGAGGAGAAAGACGCAGCGTTTACCCAGTTGAATGGTTTAGCCTTCCTTCTCCTTTAG 354 0.4011 MESSSFIMMPRSKCHKNFKMKRNPRKVKWTKAYRRVHRKDMTQDSTFEFERMRNKLERYDRNLIENVFKAIPKIDKIRVIKEERHHKNRSLLESSIGSIEEKDAAFTQLNGLAFLLL* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0100 117 Pfam Ribosomal protein L24e 11 43 IPR000988 -
Ahy13g0100 117 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 34 - -
Ahy13g0100 117 PANTHER 60S RIBOSOMAL PROTEIN L24 8 96 IPR000988 -
Ahy13g0100 117 Gene3D Ribosomal protein L24e 3 46 IPR038630 -
Ahy13g0100 117 PANTHER RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED 8 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0100 Ahy-Chr13 1065723 1066818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0100 11 89 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 69.620 1.01e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0100 K02896 - gmx:100778077 149.828