Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0086 ATGGAGGGAGGAGCGCCGCAATCCACCGGAGGAGGAGCAGGAGGTGGACCGGCGCCGTTCTTGTTGAAGACTTATGACATGGTTGACGATTCCGCCACCGATGACATCGTTTCTTGGAACAGCTCCACCAACAACAGCTTCGTTGTTTGGAACCCGCCGGAGTTCGCGCGCCTTCTTCTACCTACCTATTTCAAGCATAACAACTTTTCTAGCTTCATCCGCCAGCTTAATACCTATGGATTTCACAAAATACATCCTGAACGGTGGGAGTTTGCCAATGATGATTTTATAAAAGACCAAAAGCATCTTCTTAAGAATATCCACCGCCGGAAACCTATTCACAGTCATAGTCATCCTCCCGGCTCTGTTGTGGATCCAGAAAGGGCAGCATTTGAGGAAGAAATTGAAAAACTTAACCGTGAGAAATCTTCTATTGAATCTAATATTTTCAGCTTCAAGCAACATCAGTCAACAGCGAAGATTCATCTAGAAGATTTTCAGCAGCGATTAGATGGTATGGAGAAGAGGCAGAAACATTTGCTGAACATTTTCGAGAAGGCTCTTCAGAATCCTACTTTTGTTGAGCAGCTTTCCCAGAAAATTGAGTCCATTGATTTATCAGCGTATAACAAGAAAAGACGATTGCCTCAAGTTGATGACATGCAACCTGTTGTAGAAAGTAGTTTTGTGGACAATCCTAACAATTTTAGAATGGAATTCGGGAATGTTTTTCATCAAGATTTCTCGAACAAACTCAGACTGGAATTGTCACCAGCTGTGTCAGATATGAACTTAGTGTCACGTAGCACACAAAGTTCAAATGAACATGGGGAAAGTCCACAGAAGAAAATATCTGAAGGAGAACAAACAGGAATCCAGACAAGAACATCTGTTCCATTTGCACCAGAAACATTGGAGCTTGCTGATACCGGGGCATCTTTTACTTTCAAGATGGATTCATGTTTATCACAAAGAGTGACGAATGCTGAGAGCCCGAAACTGTGCTCATTGGAGCCAAGTAGTGAAGAAGGTGATAGTCACATATCCTGCCAACTTACTTTGGCATCGTGCCCGTTTAAGGTCAACAGAAATTCATACTCAGCAAAAGCACTCCAAATAGACTCTCAAGAAATTGGCAAGCTGGCAGAGCCTAGGTTTCATTCCAACAGTAAAGAATCCGACGGTGGAGTTTTCTCAAACCGGAACGGAGCTAATGATGCAACCAATTTGGCTTCTTCACTGGAAACTCCAAGTAACAACCAAGTTACTCAGCCAAACAGGGTAAATGATGTGTTTTGGGAACAGTTCCTTACTGAAAGACCAGGCTGCTCAGACAATGAAGAGGCAATATCCAATTACAGAGGAAACCCGTGCGATGAGCAAGATGAAGGAAGGTTGAATGCAAGGAATGTTAAGAACATGGATCAGCTTACACTTTAA 1440 0.4299 MEGGAPQSTGGGAGGGPAPFLLKTYDMVDDSATDDIVSWNSSTNNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFHKIHPERWEFANDDFIKDQKHLLKNIHRRKPIHSHSHPPGSVVDPERAAFEEEIEKLNREKSSIESNIFSFKQHQSTAKIHLEDFQQRLDGMEKRQKHLLNIFEKALQNPTFVEQLSQKIESIDLSAYNKKRRLPQVDDMQPVVESSFVDNPNNFRMEFGNVFHQDFSNKLRLELSPAVSDMNLVSRSTQSSNEHGESPQKKISEGEQTGIQTRTSVPFAPETLELADTGASFTFKMDSCLSQRVTNAESPKLCSLEPSSEEGDSHISCQLTLASCPFKVNRNSYSAKALQIDSQEIGKLAEPRFHSNSKESDGGVFSNRNGANDATNLASSLETPSNNQVTQPNRVNDVFWEQFLTERPGCSDNEEAISNYRGNPCDEQDEGRLNARNVKNMDQLTL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0086 479 MobiDBLite consensus disorder prediction 384 426 - -
Ahy13g0086 479 MobiDBLite consensus disorder prediction 266 300 - -
Ahy13g0086 479 MobiDBLite consensus disorder prediction 266 302 - -
Ahy13g0086 479 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 13 474 - -
Ahy13g0086 479 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 13 474 IPR027725 -
Ahy13g0086 479 Pfam HSF-type DNA-binding 20 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy13g0086 479 Gene3D - 15 111 IPR036388 -
Ahy13g0086 479 Coils Coil 163 183 - -
Ahy13g0086 479 SMART hsfneu3 16 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy13g0086 479 SUPERFAMILY "Winged helix" DNA-binding domain 16 110 IPR036390 -
Ahy13g0086 479 ProSitePatterns HSF-type DNA-binding domain signature. 60 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy13g0086 479 Coils Coil 128 148 - -
Ahy13g0086 479 MobiDBLite consensus disorder prediction 392 426 - -
Ahy13g0086 479 MobiDBLite consensus disorder prediction 454 479 - -
Ahy13g0086 479 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy13g0086 479 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy13g0086 479 PRINTS Heat shock factor (HSF) domain signature 20 43 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0086 Ahy-Chr13 914761 918057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0086 20 479 HSF AT4G13980 55.532 2.78e-162 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy13g0086 HSF_DNA-bind 1.30E-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0086 K09419 - gmx:100786408 756.133