Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0054 ATGATCATGGACTTTCAAGTCGTTGTTCTCGCCGGCGGGGTCTCCAAGAAACTCCTCCCTCTCGTTTCCAAGGAGATTCCGAACGCCTTGCTTCCGGTGGCGAACCGGCCTGTTATCTCTTACGTGCTCGAGCTATTGGAGCTTAGCAACCTCAAAGATCTCATTGTGGTAGTCGAAGGCGAAGATGCTGCTCTTAATGTTGGGGGCTGGATATCGGCGGCTTATGCTGATCGCCTCCATGTCGAGGTTGCTGCAGTTCCCGAGGATGTAGGAACTGCTGGTGCTATTCGAGCGATTGCACACCACCTAACTGCTAAGGACATATTGGTTGTCAGTGGTGATCTTGTTTCTGATGTGCCACTTGGTGCAGTTGCAGCTACTCATAGGCGGCATGATGCTGTTGTCACTGCTATGCTTTGTTCTGCTCCTGTAAGTGGGCCTTCAGAGTCAGGATCCTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATAACTTGATAGGATTGGATCCCACACAACAGTTCTTACTTCACATAGCAACTGGAGCTGAAGTTGAAAAAGATCTCCGAGTTCAGAAGAGCATACTCCGTGCAGCTGGCGAGATAGAAATCAGAGCTGATTTAATGGATGCTCACTTGTATGCATTCAAAAGATCAATTTTACAAGAAGTTTTAGATCAAAAGGGTACATTTCATAGCCTAAAACATGATGTATTGCCATATCTTGTCCGAAGCCAACTGAAATCAGAAGCATTACTGAATGGCGTAGCACAAGTAGAAGAAAATGGAACCGAGAAGATTATTGCTCAAAGCAATCAACAAATGTTATCACAAATACTTGCTAATGCATCTGAGCGGACGTTTCATCAACGATATGCTTTGAGTCCTAATGGCACTTCTTTCAGAAAAACTCATAAATGTTGTGTTTATATTGCCGGAAGCAACAGGTATTGTGCTCGCTTGAATTCTATACAAGCATACAGCGATATAAATCGAGATGTGATAGGAGAAGCTAATCATTTGTCAGGGTATTCATTCTCTGCTCAAAATAACATTATCCATCCTTCAGCAGAGCTTGGAGCAAAAACAACTGTAGGACCACATTGTATGCTTGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTGAAACGGTCTGTCATTGGCCGTCACTGCAGGATAGGTGCAAATGTTAAGGTTGTTAATTCAATAGTTATGAATCATGTTACCATTGGTGACGGTTGTTCAATCCAAGGTTCAGTTATCTGCAGCAACGTACAGCTACAAGAACGTGCCGTACTAAAAGATTGTCAAGTCGGAGCAGGTTTTGTGGTTGCTGCTGGTAGTGAGTGCAAAGGGGAGGTCTTAGCTAAGAAATGA 1383 0.4447 MIMDFQVVVLAGGVSKKLLPLVSKEIPNALLPVANRPVISYVLELLELSNLKDLIVVVEGEDAALNVGGWISAAYADRLHVEVAAVPEDVGTAGAIRAIAHHLTAKDILVVSGDLVSDVPLGAVAATHRRHDAVVTAMLCSAPVSGPSESGSSGGKDKTKKPGRYNLIGLDPTQQFLLHIATGAEVEKDLRVQKSILRAAGEIEIRADLMDAHLYAFKRSILQEVLDQKGTFHSLKHDVLPYLVRSQLKSEALLNGVAQVEENGTEKIIAQSNQQMLSQILANASERTFHQRYALSPNGTSFRKTHKCCVYIAGSNRYCARLNSIQAYSDINRDVIGEANHLSGYSFSAQNNIIHPSAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSIVMNHVTIGDGCSIQGSVICSNVQLQERAVLKDCQVGAGFVVAAGSECKGEVLAKK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0054 460 Gene3D Hexapeptide repeat proteins 352 456 - -
Ahy13g0054 460 MobiDBLite consensus disorder prediction 143 163 - -
Ahy13g0054 460 Pfam Nucleotidyl transferase 8 149 IPR005835 GO:0009058|GO:0016779
Ahy13g0054 460 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 3 460 - -
Ahy13g0054 460 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 351 IPR029044 -
Ahy13g0054 460 SUPERFAMILY Nucleotide-diphospho-sugar transferases 6 426 IPR029044 -
Ahy13g0054 460 CDD eIF-2B_gamma_N 5 222 - -
Ahy13g0054 460 CDD LbH_eIF2B_gamma_C 371 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0054 Ahy-Chr13 524500 528895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0054 5 451 Eukaryotic Initiation Factors Gene Family AT4G18300 22.199 2.00e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0054 K03241 - gmx:100799460 774.622