Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0038 ATGGGTGCATCGTCACACAAATGGTTGAGAACTATTCGGAGGAAGTTCCTTAGATCATTCAACAAAGACAACATCATCACTACTCTACCTTACACAAGAAGAAACCAACTCGAAGAAAATGATAATGAAGCCACCATAGGAAGCAACAATGAAGAAGAAACCACCACCATAGCTAAGGAAGATCTTGCGGCAATCAAGATCCAAGCTTATTTTAGGGGTCATCTTGCAAGAAGAGCATATGGAGGTCTTAGAAGCATTGTGAAGGTGCAAGCATTGGTGCGTGGTGTTTTTGTGAGGAAACAATCACATATTGCTATGCAATGTATGCATGCAATTCTTCGTTTACAACTTAGGGTTCGTGCAAGGCACCTCCACCTCCATGGAACCTTTCATAATTATTAA 402 0.4104 MGASSHKWLRTIRRKFLRSFNKDNIITTLPYTRRNQLEENDNEATIGSNNEEETTTIAKEDLAAIKIQAYFRGHLARRAYGGLRSIVKVQALVRGVFVRKQSHIAMQCMHAILRLQLRVRARHLHLHGTFHNY* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0038 133 ProSiteProfiles IQ motif profile. 60 88 IPR000048 GO:0005515
Ahy13g0038 133 ProSiteProfiles IQ motif profile. 84 111 IPR000048 GO:0005515
Ahy13g0038 133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 103 IPR027417 -
Ahy13g0038 133 Pfam IQ calmodulin-binding motif 63 80 IPR000048 GO:0005515
Ahy13g0038 133 Pfam IQ calmodulin-binding motif 84 101 IPR000048 GO:0005515
Ahy13g0038 133 PANTHER IQ-DOMAIN 5-RELATED 6 125 - -
Ahy13g0038 133 SMART iq_5 83 103 IPR000048 GO:0005515
Ahy13g0038 133 SMART iq_5 59 81 IPR000048 GO:0005515
Ahy13g0038 133 PANTHER OS04G0561100 PROTEIN 6 125 - -
Ahy13g0038 133 Gene3D - 58 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0038 Ahy-Chr13 385159 386061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0038 32 127 IQD Protein Family AT3G51380 54.167 4.63e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0038 - - ccaj:109793784 130.183