Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3101 ATGGGGAAGACAGGGAAATGGCTTAGAAACTTATTGACAGGGAAGAGAGATAAAGAAAAATACAGGGAAAAATGTGCAACCATTAGCCCAATTGTTCTGTCAAATGGTACAGAAAATCCAATCACTCCAAACTCAACAACACCAAAGGAGAAAAGAAGGTGGAGTTTCAGGAGATCATCAGCCACAGCTACAGCTTCCAAGGAACTGAATTTTGCAGAAGCAAGTGCCACAGATGCTCAGAATGAGCAGAAGAATCATGCCACGGCCGTGGTTGCCGCCACAGCTGCTGCCACCGTGATCCGCTTGACTTCCAGTTCTAATGAAAGAACTGGAAGCATTGAAGAAGCTGCTGCCATTAAAATTCAATCTGTGTTCAGGTCCTACTTGGCAAGAAAAGCATTGTGTGCTCTTAGAGGGATAGTGAAGTTGCAGGCACTGGTAAGGGGTTACTTGGTGAGAAAACAGGCCAGAGATACATTAAGGTGCATGCAGGCTTTGGTCATAGCCCAAGCCAGAGCTCATGCTTCAAGGCTTCGAATGGAATCACAAGGGAAGCGAAAAACCTTATTAGAGGATAATTTGTTCAGGCATATGTATAATGAACATGAGAGGGGCATGGAAGAGAACATCAAGATTGTGCAGATGGATGTTTGTGATTCAAGAGGAAGAAACAGCACATCAAATCACGGATACGGCCATAGATATTCAACATATTATTCACCAAATGGTTATGTTTATTCATACTTAAAAGAAGGAGGCAGCAACAAGGCATCGCCAGCACCTTCAGCAATGACAGAGTTCAGTCCAAGAGCATGCAGTGGCCACTTTGAGGATTGTGGAGCCTTCAACACAGCACAAAGCAGCCCTCATTACTACTCAGCAGTTTCAAGAGAGGAGGATTTGAATCTTCCTTTTGCTTTTCCTAAACCAAACTATGCAGCAGACTCCATGTCCTATGACTACCAATTTTTCCCAAATTACATGGCTAACACTGAATCATCAAGGGCCAAAGCCAGATCACACAGTGCACCAAGGCAAAGGCCAGATTCATTCGAGAGGCAGCCAAGCCGGCGAAGAGCTTCGGTGGAGGGAAGAAGTGTCCCTAGGCCAATGAGAATGCAGAGGTCATCTTCACATGTTGGTCTCACTGCACAAAACTACCAATATCCTTGGTCAATGAAGCTTGATAGGTCAACTGTTTCCCTCAAAGACAGCGAGTGTGGCTCTACAACTTCAGTGATCACAAATTCCAATTACTGCAGATCTCCTGCTGCATATAATCCTCGTGGACATAGGTACTGA 1302 0.4478 MGKTGKWLRNLLTGKRDKEKYREKCATISPIVLSNGTENPITPNSTTPKEKRRWSFRRSSATATASKELNFAEASATDAQNEQKNHATAVVAATAAATVIRLTSSSNERTGSIEEAAAIKIQSVFRSYLARKALCALRGIVKLQALVRGYLVRKQARDTLRCMQALVIAQARAHASRLRMESQGKRKTLLEDNLFRHMYNEHERGMEENIKIVQMDVCDSRGRNSTSNHGYGHRYSTYYSPNGYVYSYLKEGGSNKASPAPSAMTEFSPRACSGHFEDCGAFNTAQSSPHYYSAVSREEDLNLPFAFPKPNYAADSMSYDYQFFPNYMANTESSRAKARSHSAPRQRPDSFERQPSRRRASVEGRSVPRPMRMQRSSSHVGLTAQNYQYPWSMKLDRSTVSLKDSECGSTTSVITNSNYCRSPAAYNPRGHRY* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3101 433 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 410 - -
Ahy12g3101 433 Pfam Protein of unknown function (DUF4005) 310 366 IPR025064 -
Ahy12g3101 433 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Ahy12g3101 433 Pfam IQ calmodulin-binding motif 138 157 IPR000048 GO:0005515
Ahy12g3101 433 Pfam IQ calmodulin-binding motif 116 134 IPR000048 GO:0005515
Ahy12g3101 433 MobiDBLite consensus disorder prediction 334 379 - -
Ahy12g3101 433 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Ahy12g3101 433 PANTHER IQ-DOMAIN 5-RELATED 1 410 - -
Ahy12g3101 433 SMART iq_5 113 135 IPR000048 GO:0005515
Ahy12g3101 433 SMART iq_5 136 157 IPR000048 GO:0005515
Ahy12g3101 433 MobiDBLite consensus disorder prediction 338 365 - -
Ahy12g3101 433 Gene3D - 114 166 - -
Ahy12g3101 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 157 IPR027417 -
Ahy12g3101 433 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3101 Ahy-Chr12 120447267 120450351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g3101 1 421 IQD Protein Family AT4G14750 44.295 3.14e-97 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3101 - - gmx:100817667 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3101 12 120447267 120450351 Ahy2g2684 2 102849342 102852426 hybridization