Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3094 ATGGAGACTGAAGCTCCTGAAGACAGAGAGGATAACAGAGCTGATGACGACACAATCGAAAAGGGTCCAGAATCATTTGAAATAACTGAGGAACTCTCAAGTAGACGACATGGGACTAGGAAAAGCCTCATCTTGGAGATTCCAACAACAAGCACTGTGGATGAAGATTTTGTGAGGATAAACATGCCTCTAACTCCTCCTCCAAGAAAAGTGGCCTTTTCACCATGTCCAAGCCCTTCAGCATCAAGGAATAGATCAACTATGAAAACTTTATTTCCCAAACTCACTTTAAAAATCAGGAGCACAAGCTCACAGCAGATCGAAAATGCTGCTTTTCTTGCACTCGAAGGTTCACCAAAGGTGGCACCAAAGAAGCCTCTTCTTCCGAGGACATTTTCACTTACAAAGTTGATCACCCCTAGAGGGAAGAACACGGCATCCTTGCCTGTAACACCGATTGCTCACTCTAATCCAGGGTCCACACATGGAGGAAATGCTGCTTATCTAGCTTCAATTGATAAAGGGATCCAATTACCAATGCATCGTTCTCGTTCAGTTCCAATACTTAACAAGGCAGGGAGCACAAGTGTAGGTGGAATGTTTCGTATAATTCCAACCACACCAACATCAGCGACATCTCCATCTGGTGATAGTGTTGAGAATGAGGATGGTGGTGAAGATATTCCCGAAGAAGAAGCTGTTTGTAGAATTTGTATGGTTGAATTGGGGGAAGGTGCTGATGATACTCTTAAATTGGAGTGTAGTTGCAAAGGTGAACTTTCACTGGCTCACCAACAATGTGCAGTTAAATGGTTTAGCATTAAAGGAAACAGAACATGTGATGTTTGCAAGCAAGAAGTTAAGAACTTACCTGTGACTCTCTTGCGGCTTCAAACTGCACCTAGAGGGCAGCATGCTGAGATTTCTCAAACAAGGCAAGGGGTTTGGCAGGATGCTCCCATTCTTGTAGTTGTCAACATGCTGGCTTACTTTTGTTTTCTTGAGCAGCTTCTTGTTTCAAGTATGGGCTCTGGTGCTGTTGCCATGTCTCTTCCATTTTCTTGTATACTTGGTCTTCTTGGTAGCATGACATCTACAACAATGGTGAGGAGAAATCATGTTTGGGTTTATGCAACTGTGCAGTTTGTTCTGGTGGTTGTCAGTGGACACCTTTTCTATTCATTGGTTCATATGCAAGCTGTTCTAGCTATTTTGCTTGCCACATTTACTGGCTTTGGGGCTGTGATGTTTGTAGCTTCTGTTCTTGCTGAGATATCAAATTGGAGGAGAATAAGTCTTGGTCAGTTGAATCAAGAGGAGGCAGTGGCACCTGATGAATCATCTTCAGCAGGTCATCATCAATCTGAGGCTCCTGAAAGTAATTTGAGAGATTCCCCTCTTATGCATGTGAACCAGCTAAATGTGCTCCCACTCGGGTAG 1440 0.4347 METEAPEDREDNRADDDTIEKGPESFEITEELSSRRHGTRKSLILEIPTTSTVDEDFVRINMPLTPPPRKVAFSPCPSPSASRNRSTMKTLFPKLTLKIRSTSSQQIENAAFLALEGSPKVAPKKPLLPRTFSLTKLITPRGKNTASLPVTPIAHSNPGSTHGGNAAYLASIDKGIQLPMHRSRSVPILNKAGSTSVGGMFRIIPTTPTSATSPSGDSVENEDGGEDIPEEEAVCRICMVELGEGADDTLKLECSCKGELSLAHQQCAVKWFSIKGNRTCDVCKQEVKNLPVTLLRLQTAPRGQHAEISQTRQGVWQDAPILVVVNMLAYFCFLEQLLVSSMGSGAVAMSLPFSCILGLLGSMTSTTMVRRNHVWVYATVQFVLVVVSGHLFYSLVHMQAVLAILLATFTGFGAVMFVASVLAEISNWRRISLGQLNQEEAVAPDESSSAGHHQSEAPESNLRDSPLMHVNQLNVLPLG* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3094 479 MobiDBLite consensus disorder prediction 1 35 - -
Ahy12g3094 479 PANTHER OS02G0165000 PROTEIN 9 453 - -
Ahy12g3094 479 SMART ringv_2 234 284 IPR011016 GO:0008270
Ahy12g3094 479 SUPERFAMILY RING/U-box 231 287 - -
Ahy12g3094 479 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 221 292 IPR013083 -
Ahy12g3094 479 MobiDBLite consensus disorder prediction 442 462 - -
Ahy12g3094 479 ProSiteProfiles Zinc finger RING-CH-type profile. 227 290 IPR011016 GO:0008270
Ahy12g3094 479 MobiDBLite consensus disorder prediction 207 226 - -
Ahy12g3094 479 CDD RING_CH-C4HC3_MARCH 235 284 - -
Ahy12g3094 479 MobiDBLite consensus disorder prediction 442 456 - -
Ahy12g3094 479 Pfam RING-variant domain 235 283 IPR011016 GO:0008270
Ahy12g3094 479 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 9 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3094 Ahy-Chr12 120389962 120395193 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g3094 232 290 C3H Transcription Factor Family AT2G37950 42.373 1.36e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3094 - - gmx:100787963 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3094 12 120389962 120395193 Ahy12g3094 12 120389962 120395193 ECH
Ahy12g3094 12 120389962 120395193 Ahy2g2677 2 102792037 102797268 hybridization