Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3074 ATGATAACGTTTATGGAGTCAAAGGAGAAAACAAGAGAAGCAGTGGAGAAGTGTCTGGACCCTCAGCTATGGCATGCGTGTGCAGGTGGCATGGTGCAGATGCCACAGGTGAACACAAAGGTCTATTACTTCCCTCAGGGCCATGCTGAGCATGCATGTGGTCCTGTGAACTTTAGGACCTGCCCCAAAGTGGTTCCACCTATGGTTCCATGCAGGGTTGCTGCTGTGAAGTACATGGCTGATCCTGAGACTGATGAGGTCTATGCCAAGCTTAGGCTTCTTCCTCTCAGTGGCAATGATGCTGATTATGGAAATGATGCTGGTGTTGTTGGAGGAGGTGGAATCCATGAACCTGAGGCTCAGGATAAGCCTGCTTCATTTGCAAAGACCTTGACTCAATCTGATGCCAACAATGGTGGGGGGTTTTCGGTTCCTAGGTATTGTGCCGAGACCATTTTCCCGCGGCTGGACTACTCGGCCGACCCTCCGGTACAGAGCATACTTGCAAAAGATGTTCACGGCGAGACGTGGAAGTTTAGGCACATTTATAGGGGCACGCCGAGGCGGCACCTCCTAACTACCGGTTGGAGTACTTTTGTGAATCACAAGAAGCTTGTGGCTGGGGACTCAATTGTGTTTTTGAGGGCGGACAATGGGGAACTGTGTGTTGGGATTCGGAGAGCAAAGAAGGGTCTAGGAGGTGGGCCTGAGGCTTCTTCAGGTTGGAATCCAGCCGGTGGAAATTGTCCAATGCCTTATGGTGGATTTCCAGGGTTTCTGAAGGAGGATGATATGAGGCTCTTGAGAAATGGATTGGACACTGGCACAAGAATGATGGGGAAGGGAAAAGTGCGGCCTGAAGCAGTCATTGAAGCTGCTACTCTTGCTGCCAACAAGCAACCTTTTGAGGTCGTTTACTACCCTCGCGCGAGTACGCCCGAGTTCTGTGTGAAGGCCTCACTGGTTGAAGCTGCACTGCAGATTAGGTGGTGCTCTGGAATAAGGTTCAAGATGGCCTTTGAAACCGAGGACTCGTCGCGAATTAGCTGGTTTATGGGTACCATATCTTCAGTTCAGGTTGCTGATCCCCTTGGATGGCCTAACTCACCTTGGAGGCTTCTTCAGGTTACATGGGACGAACCAGATTTACTTCAAAATGTGAGAAGAGTGAGTCCATGGCTTGTTGAATTGGTATCAAGCATGCCTGCCCTTCATCTTTCACCTTTCTCACCGCCGCGGAAGAAATTAAGATTGCCCCAACACCCGGATTTTCCCCTTGATGGCCAAATTCATGTGCCAACATTTTCCAGCAACCTTCTAGGTCCGAGTAACCCCTATGGTTGTCTACCCGAAACTACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCATTATGGTATATCCTTATCAGATCTCCACCTCAGTAAACTGCAGTCAGGTCTATATTCGGCTGGTTTCCCGTCTCTTGATCACGCTGCTACACCAATCAGGGTCCCCAATAACTTACTATTGCAAAAACCCAGCACCAGTGAAAGTGTCTCTTGCTTGTTATCTATGGCGAGTTCTGTGCAATCCTCAAAGAAACCAGATGAAGGGAAGACACCACAGCTTGTGCTTTTTGGCCAAAAGATTCTCACAGAGCAGCAGCTCTCTCTCAGCAGCTCTGGTGATGCTGTCTCCCCTGTTCTTACCGGAAATAGTTCATCCGATGGAAATGCTGATAAACTCAATAATTTTTCTGATGGTTCTGGTTCTGCTCTGCATCAGCAAGGTATACCAGAACGCTCCTCTTGTGAGAGGTTCCCGTGGTATAGGGATCACCGTCAAGAAACCGAGGCCGGTTTGGAGACCGGTCACTGCAAAGTTTTTATGGAATCGGAAGATGTAGGTCGGACATTGGACCTCTCGTTGCTTGCTTCGTACGATGAACTGCACAGAAAGCTAGCAGACATGTTTGGCATCGAAAAATCCGAGATGCTAAGTCATGTGCTCTACCGAGACATAAATGGTGCAGTCAAACACCTTGGAGATGAACCATTCAGTGATTTCTCAAGAACAACAAAGAGATTGACTATTCTAATGGATTCCAGCAGTGACAATGTAGGAGTGTAG 2112 0.4886 MITFMESKEKTREAVEKCLDPQLWHACAGGMVQMPQVNTKVYYFPQGHAEHACGPVNFRTCPKVVPPMVPCRVAAVKYMADPETDEVYAKLRLLPLSGNDADYGNDAGVVGGGGIHEPEAQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQSILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRADNGELCVGIRRAKKGLGGGPEASSGWNPAGGNCPMPYGGFPGFLKEDDMRLLRNGLDTGTRMMGKGKVRPEAVIEAATLAANKQPFEVVYYPRASTPEFCVKASLVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSVQVADPLGWPNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSSMPALHLSPFSPPRKKLRLPQHPDFPLDGQIHVPTFSSNLLGPSNPYGCLPETTPAGMQGARHAHYGISLSDLHLSKLQSGLYSAGFPSLDHAATPIRVPNNLLLQKPSTSESVSCLLSMASSVQSSKKPDEGKTPQLVLFGQKILTEQQLSLSSSGDAVSPVLTGNSSSDGNADKLNNFSDGSGSALHQQGIPERSSCERFPWYRDHRQETEAGLETGHCKVFMESEDVGRTLDLSLLASYDELHRKLADMFGIEKSEMLSHVLYRDINGAVKHLGDEPFSDFSRTTKRLTILMDSSSDNVGV* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3074 703 Gene3D - 125 229 IPR015300 -
Ahy12g3074 703 MobiDBLite consensus disorder prediction 556 592 - -
Ahy12g3074 703 SUPERFAMILY DNA-binding pseudobarrel domain 121 228 IPR015300 -
Ahy12g3074 703 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Ahy12g3074 703 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Ahy12g3074 703 Pfam Auxin response factor 292 375 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy12g3074 703 Gene3D - 615 701 - -
Ahy12g3074 703 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 694 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy12g3074 703 Gene3D - 329 403 - -
Ahy12g3074 703 PANTHER AUXIN RESPONSE FACTOR 7 694 - -
Ahy12g3074 703 CDD B3_DNA 126 227 IPR003340 GO:0003677
Ahy12g3074 703 ProSiteProfiles PB1 domain profile. 617 700 IPR000270 GO:0005515
Ahy12g3074 703 SMART B3_2 127 229 IPR003340 GO:0003677
Ahy12g3074 703 MobiDBLite consensus disorder prediction 556 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3074 Ahy-Chr12 120203136 120206994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g3074 14 703 B3 DNA Binding Superfamily AT4G30080 57.468 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy12g3074 B3 1.20E-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3074 - - gmx:100796522 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3074 12 120203136 120206994 Ahy19g2621 19 146576428 146578926 ECH
Ahy12g3074 12 120203136 120206994 Ahy12g3074 12 120203136 120206994 ECH
Ahy12g3074 12 120203136 120206994 Ahy18g0492 18 4500431 4504490 ECH
Ahy12g3074 12 120203136 120206994 Ahy13g0333 13 3391388 3395119 ECH