Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3063 ATGAATGGGATGAGGAATAATAATGGTAGTTCTTATTCCTCCTCGGTAGCTACTCTTGTTTTCTTGGTGTTGTTTTTTGTATCATTGAGTTTGCTACCAACTAGGATTCAATGTGCGGATCAACCATATGTAACCTCGTTTTATGCTGAGGAAATCTATAAAGAACTTCAGAGTCTTGCAACGCTTTTTACTAGCGACATTAGAAAAACTTTAAGCTTCTGCATAAAGGACATGAAAAAAGATTGGGAGGAAGCTTTTGATTTTAAGGGGAGGTTAGACTTTGTGGATTCTTGTGTAAAGAAAAAAGGAGATTTCAGAGATAGAATATGCACTTCAGTTGAAATAAGGTACTATTTTCAGAGTTTTATGGATACAACAGGAACTACATCTCAGAGTTATGTGAAACCGAACAAGAATTGCAATCTGTCATCATGGGTTGCTGGTTGTGAACCTGGTTGGGGATGTAGTGTTGGAAGCACTGTTGACCTCAAAAAGGAATTACCTGAGATTCCTTCTAGAATTGATAATTGTCAACCTTGTTGTGAGGGTTTCTTTTGCCCTCAAGGCTTGACTTGCATGATACCTTGCCCACTAGGCTCTTATTGTCCAATTGGGAAACTGAATACAACCACTTCAACATGTGAACCATATAGCTACCAGATACCTGCAGGAGATCCAAACCATGCATGTGGAAGTGCAGATGTATGGAGTGGAGTTGTGAACAACAGTGATATCTTTTGTGATCCAGGATCATATTGCCCAACTACAACACGTAAAGTGGCTTGTGATCGTGGATATTACTGCAGAAGGGGTTCCACTCGCCAAAATTCATGCTCCATGTTGAGTTCCTGTAAAGCAAACACAGAAAGCCCAAATATGCATGCTTATGCTGCTTTGCTTATTGTTGCACTGAGTACTCTGCTGATCTTCATTTACAACTGTACTGATCAAATTCTAGCAACAAGAGAAAAGCTAAAGGCGGATTCTAGAGAGCGAGCTGCCAAGCATGTGAAAGAGATTGCACAAGCAAGACAAAGATGGAGATCAGCCAAAGATAGCATTACAAAGAAGAAAGGTTTGCAAGAACAATTAAGATCCTTTTCGCGCCGAAAATCCATGAAACAGGACACTACTAATCCTGCTGCTGCTGCTTCTCCTCTGCCACCTTCGGACAACTCTTCTGAGAAAAAGGAAAGCAACCTCACAAAGATGATGAACTCGGCTGACAGTGATTTGAACAGCAGCGAAGGATTCCACTTGAACATTGGAGATAAGAACCTGAAGAACAAGCAACCAAAGGGTAAAAATCTGCACACACAAAGCCAGATTCTAAGGTATGCTTATGGGAAGATTGAGAAGGAGAAAGAACAAGAACAGAGCAATAACTTAACATTCTCTGGAGTTATATCAATGGCTACTAATGTTGATGAAGAGATTAAAGCAAGGCCAGCCATTGAAGTTTCATTCAAGGATTTGACTCTAACTTTGAGAGGGAAAAAGAAGCATCTTCTAAGGTGTGTGACAGGTAAACTGATGCCTTGTAGAGTGTCAGCTGTGATGGGACCCTCTGGAGCTGGCAAGACCACTTTTCTTTCTGCTTTGGCTGGCAAAGTTAGAGGTTGCACCATGACTGGATCTATTCTTATCAATGGCAAACATGAATCCATTCATTGTTATCAAAAGATTATCGGTTTTGTGCCTCAAGATGATATTGTCCATGGTAACTTGACCGTGGAGGAGAATCTTCGCTTTAGCGCAAGATGCAGGTTGTCAGCAGACATGGCAAAAGCAGATAAGGTTCTGATTATAGAGAGAGTAATAGAGACATTAGGACTGCAAGCAATAAGAGATTCCCTTGTTGGGACAGTGGAAAGGAGAGGAATATCAGGAGGACAAAAGAAGCGTGTGAATGTGGGATTAGAAATGGTGATGGAGCCTTCACTATTGATATTAGATGAACCTACAACAGGTCTTGATAGTGCTTCATCCTCATTGCTTCTTAAAGCTCTTAGGCGTGAAGCCCATGAAGGGGTTAACATATGCATGGTACTTCACCAACCAAGCTATACATTGTTCAGAATGTTTGATGATATAATATTTCTAGCCAAAGGGGGGCTTACTGCATATCATGGACCAGTGAAGAAAGTTGAGGAATACTTTGCTAGCATTGGAATCCCTGTCCCTGACCGTGTGAATCCCCCTGACCACTTCATTGATGTTTTGGAAGGTATTGTGAAGCCTTCTTCCGGTGTCACATACCAGCAGCTTCCCATCAAGTGGATGCTCCATAATGGTTACAATGTTCCTCCTGATATGCTTCATGTAATGTCTGAAAACCATGATCCTGAATCTTCATCCAAGGGTGAAGCTGAAGGTGGTGGTGAAGAGCAATCAGAGCATCATTGGGATAGTGTTGAGATAGAGAAAGATCATGTAGACTCAAACTTTTTGATCGTTAAGGATTTGTCCAATAGAAGAACACCTGGTGTATTTCGACAATATAGATACTATCTTGGCAGGGTTGGTAAGCAGCAACTACGAGAAGGAAAATCTCAAGCAGTTGATTATCTACTTTTGTTAGTTGCTGGTGCGATCTTAGGAATGCTAACTACAGCCAATGATGAAACGTTTGGTTCCCTTGGATATACATTCACAGTTATTGCTGTGTCTCTACTGTGCAAGATTGCAGCTCTTAGATCATTTTCACTTGACAAATTACAGTACTGGAGGGAAAGTGCATCAGGGATTAGTAGTCTTGCTCATTTTATGTCCAAAGACACAATTGATCTTTTCAACACAGTAATCAAGCCTGTGGTGTATCTATCCATGTTCTATTTCTTTAGCAATCCAAGGTCAAGCTTTGCAAGTAACTATGTGATTCTGCTTTGCCTTGTCTACAGTGCTACTGGCATGGCTTATATATTAGCAATTTACTTGGCTCCTTCTGCTGCACAACTGTGTTCAGTGCTATTTCCTGTGGTTATGACTCTGATTGCAAGCCAAAAGAGAGACACAACACTGATGAAGATCCTAGCAAAACTGTGCTACCCAAATTATGCATTAGAGGCCTTTGTAGTTGCAAATGCTGAAAGGTACACAGGAGTGTGGCTAATTACACGTTGTAGTTCACTTAAGACTAATGACTATAATGTGAACGAGTGGATTATGTGCCTTGTAATCCTCATTCTCTATGGAATACTCTTCAGAATTCTCGCCTTTGGTTGTCTCTTGATCACACAAAGGAAGTAG 3249 0.409 MNGMRNNNGSSYSSSVATLVFLVLFFVSLSLLPTRIQCADQPYVTSFYAEEIYKELQSLATLFTSDIRKTLSFCIKDMKKDWEEAFDFKGRLDFVDSCVKKKGDFRDRICTSVEIRYYFQSFMDTTGTTSQSYVKPNKNCNLSSWVAGCEPGWGCSVGSTVDLKKELPEIPSRIDNCQPCCEGFFCPQGLTCMIPCPLGSYCPIGKLNTTTSTCEPYSYQIPAGDPNHACGSADVWSGVVNNSDIFCDPGSYCPTTTRKVACDRGYYCRRGSTRQNSCSMLSSCKANTESPNMHAYAALLIVALSTLLIFIYNCTDQILATREKLKADSRERAAKHVKEIAQARQRWRSAKDSITKKKGLQEQLRSFSRRKSMKQDTTNPAAAASPLPPSDNSSEKKESNLTKMMNSADSDLNSSEGFHLNIGDKNLKNKQPKGKNLHTQSQILRYAYGKIEKEKEQEQSNNLTFSGVISMATNVDEEIKARPAIEVSFKDLTLTLRGKKKHLLRCVTGKLMPCRVSAVMGPSGAGKTTFLSALAGKVRGCTMTGSILINGKHESIHCYQKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADMAKADKVLIIERVIETLGLQAIRDSLVGTVERRGISGGQKKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREAHEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFASIGIPVPDRVNPPDHFIDVLEGIVKPSSGVTYQQLPIKWMLHNGYNVPPDMLHVMSENHDPESSSKGEAEGGGEEQSEHHWDSVEIEKDHVDSNFLIVKDLSNRRTPGVFRQYRYYLGRVGKQQLREGKSQAVDYLLLLVAGAILGMLTTANDETFGSLGYTFTVIAVSLLCKIAALRSFSLDKLQYWRESASGISSLAHFMSKDTIDLFNTVIKPVVYLSMFYFFSNPRSSFASNYVILLCLVYSATGMAYILAIYLAPSAAQLCSVLFPVVMTLIASQKRDTTLMKILAKLCYPNYALEAFVVANAERYTGVWLITRCSSLKTNDYNVNEWIMCLVILILYGILFRILAFGCLLITQRK* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3063 1082 ProSitePatterns ABC transporters family signature. 628 642 IPR017871 GO:0005524
Ahy12g3063 1082 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 41 1078 - -
Ahy12g3063 1082 MobiDBLite consensus disorder prediction 775 801 - -
Ahy12g3063 1082 Gene3D - 474 723 IPR027417 -
Ahy12g3063 1082 Pfam ABC-2 type transporter 685 1082 IPR043926 GO:0140359
Ahy12g3063 1082 Coils Coil 326 346 - -
Ahy12g3063 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 710 IPR027417 -
Ahy12g3063 1082 Pfam ABC transporter 507 655 IPR003439 GO:0005524
Ahy12g3063 1082 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 487 728 IPR003439 GO:0005524
Ahy12g3063 1082 MobiDBLite consensus disorder prediction 373 419 - -
Ahy12g3063 1082 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 41 1078 - -
Ahy12g3063 1082 MobiDBLite consensus disorder prediction 344 372 - -
Ahy12g3063 1082 SMART AAA_5 513 705 IPR003593 -
Ahy12g3063 1082 MobiDBLite consensus disorder prediction 344 419 - -
Ahy12g3063 1082 CDD ABCG_EPDR 484 711 - -
Ahy12g3063 1082 MobiDBLite consensus disorder prediction 776 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3063 Ahy-Chr12 120104195 120108440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g3063 474 688 Calmodulin-binding Proteins AT2G36910 27.727 1.42e-12 70.5