Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3060 ATGAGCTCCGAAATAGTTCTCCATCAGCAATTTTCCCAATCAGAACCTCTTCCTATTTCCTCCACCGTCACCACCACAACCACTACCACCGGCGTCGCCCTCAGAAAATCCTCCGGCGCCGGCGCATTATCCACGACTTCATCACGCTCCAACAAGGACCGCCACACCAAGGTCAACGGCCGCGGCCGCCGCGTTCGCATGCCGCCGCTCTGTGCCGCCCGGATCTTTCAACTCACACGCGAGCTCGGCCACCGCTCCGACGGCGAAACCATCGAGTGGCTTCTCCGCCACGCTGAGCCATCCATCATCGCCGCAACCGGCACAGGTACCGTCCCTGCCGCCCCGGTCTCTTCCTCCGCCGCCGCCGTCACATCCTCAGCTCCCTCTGTTTCGTGCCGTGTCCAGCCGTCTGCATCCGCCACTCCGACGATGGTCTGCGCCGGCGGGAGTCAGTGGCCGAGCCGCCGACTCGACCTCTGCCAGCCTCCTCCAGGAATGGAGTACGCCTCGGTGAACGGTCACCGATACATGCCGTTCACGTCGTTGCTGTTGCAGCCAGCCACGGCGGATGAATCGCAGCACGAGGAGGCTCTCAGCGATCAATGA 606 0.632 MSSEIVLHQQFSQSEPLPISSTVTTTTTTTGVALRKSSGAGALSTTSSRSNKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAAPVSSSAAAVTSSAPSVSCRVQPSASATPTMVCAGGSQWPSRRLDLCQPPPGMEYASVNGHRYMPFTSLLLQPATADESQHEEALSDQ* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3060 201 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 47 138 - -
Ahy12g3060 201 MobiDBLite consensus disorder prediction 36 60 - -
Ahy12g3060 201 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 47 138 IPR005333 GO:0003700
Ahy12g3060 201 ProSiteProfiles TCP domain profile. 51 105 IPR017887 -
Ahy12g3060 201 Pfam TCP family transcription factor 50 138 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3060 Ahy-Chr12 120091230 120092281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g3060 52 188 TCP Transcription Factor Family AT2G37000 56.522 3.28e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy12g3060 TCP 3.00E-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3060 - - cam:101510590 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3060 12 120091230 120092281 Ahy9g1889 9 104909199 104915752 hybridization