Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3055 ATGGCTAAGTCCTACTATCTTGGAAAGGTGAAAAGGGGTATCTCAAACTTGGTGCATCACAGAAGGGCTAAATCACTAAGTTACATTAGTGATGATGATGAAGATGTTATTACCACTATTACTAGTAATAATAATAATAACAATAATACTAGGGAAGGGTACTTAACTGTTGTTGCTGAAAAGGGTAGAGAGAAAAAGAGGTTCAGTATTGAGTTGGATTACCTGAATGATCCTGAATTCAAGTTGCTGCTTGATCAAGCTCAGCAAGAATATGGTTTCAGACAGAAGGGAGCTCTTTCTGTCCCTTGCAGGCCTCATGAACTCCAAAAGATTTTGGATGGTGGCAATGAAAGAAGGTTGAGTAGGTCATAA 372 0.3844 MAKSYYLGKVKRGISNLVHHRRAKSLSYISDDDEDVITTITSNNNNNNNTREGYLTVVAEKGREKKRFSIELDYLNDPEFKLLLDQAQQEYGFRQKGALSVPCRPHELQKILDGGNERRLSRS* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3055 123 Pfam Auxin responsive protein 41 112 IPR003676 GO:0009733
Ahy12g3055 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 115 IPR003676 GO:0009733
Ahy12g3055 123 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 5 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3055 Ahy-Chr12 120065093 120065464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g3055 52 118 Calmodulin-binding Proteins AT2G24400 40.299 4.04e-11 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3055 12 120065093 120065464 Ahy2g2639 2 102467168 102467539 hybridization