Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3053 ATGGCAAAGACTAGTGTTTGTGGAAGATTGTTGAAGGGGGGCTTTGGAGGAATGTTGCTCATAATGAGGAAACTGAGGACTAGCTTAACACATTCAAAAGGGGTAAAACAAGGTCACTTTGTGGTGATTGCAACTCAAGGGTGGAAGCCAGAGAGGTTCTTCATCAAATTGAGCTATTTGGATCACCCTGAATTTGTGAAGTTGCTAGAGCAGGCTGAAGAAGAGTTTGGATTCTCTCAGGTGGGAGCATTGGAAATTCCTTGTGAGCCTGATGAGTTGAAGAGAATCATTAGAAGAGTCACTAAGAGTGAGTTTGATTGGAAGGAATGGAACAATGAAGAGGAAAAGTAA 351 0.4217 MAKTSVCGRLLKGGFGGMLLIMRKLRTSLTHSKGVKQGHFVVIATQGWKPERFFIKLSYLDHPEFVKLLEQAEEEFGFSQVGALEIPCEPDELKRIIRRVTKSEFDWKEWNNEEEK* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3053 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 100 IPR003676 GO:0009733
Ahy12g3053 116 PANTHER SMALL AUXIN-UP RNA-RELATED 16 100 - -
Ahy12g3053 116 Pfam Auxin responsive protein 30 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3053 Ahy-Chr12 120051196 120051867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g3053 35 104 Calmodulin-binding Proteins AT4G34750 41.429 8.29e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3053 - K14488 gmx:100795119 137.117