Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3032 ATGGTAGAAGCAGAGATGAGAAAAATGAAGAAGTTGAGCTACCAAATTGTAACTGGGAGGTGGTTCATGATCTTTGCCTCATGCTTAATCATGTCAGTTTCAGGAGCAACATACATGTTTGGTTTATACTCCAATGAAGTCAAATCCTCATTGGGATATGACCAATCTACCCTCAACTTGATTAGCTTCTTCAAGGACCTTGGTGCAAATCTTGGCATATTCTCAGGGCTTATCAATGAACTCACACCTCCATGGGTGATTCTCTCCATTGGTGCAGCCATGAACTTCTTTGGTTACTTCATGGTTTGGCTCTCTGTCACTGGCCACATTGCAATTCCCCACGTTTGGCAAATGTGCCTATACTTCTATATTGGAGCTAATTCGCAATCATTTGCCAACACTGGTGCATTGGTAACGTGTGTGAAAAGCTTCCCAAGAAGCCGAGGAAGTGTTATTGGGCTTCTAAAAGGCTATGTTGGACTAAGTGGTGCAATCTTCACTCAACTCTACCATGCTTTTTATGGTGATGATTCTAAGGCTCTCATCTTGCTCATTGGATATCTTCCTGCTGTTATAAGCTTCTTGTTTCTCCCCACGGTTCGAATCCTCGACATCGTTCCGCAACGGAAGGAGCTGAGAGTTTTCTACAAGCTTCTCTATATATCACTTGGTGTTGCTGCTTTTCTTATGCTGTTGATTGTGTTACAGAACAGGTTGAGTTTCAACAGGGTTCAGTACATTGTTGATGGCATCTTTGTTCTCTTGTTGCTCCTTCTTCCACTTGTTGTTGTCTTTAAAGAAGAACTTAACATCTTCAACAATCATAATAATAACATCAATCATGCTTCTTCTTCTTCTGATTTCAAAGTTGTCACACAAGTTCCATCTCCTGCTAGTGAATTGTCCCAACTAGAATCACAGTCACAGGTAGCACCAAATTCAAATAGTGCCATTTCACATGGTGGAACTTCATGTCTAAGCAACATATTCAAACCCCCAAGCAGGGGAGAGGACTACACAATCTTGCAAGCACTTTTCAGCATTGACATGTTAATCCTCTTCATAGCAACAACATTTGGTGTTGGTGGAACATTAACAGCACTAGACAACTTGGGACAAATTGGTAAATCACTAGGTTATCCCAAAAAGAGCCTCACAACATTTGTATCCCTAGTTAGCATATGGAACTACCTCGGACGCGCCTCTTCAGGCTTCGCGTCCGAGGTATTCCTAAAAAAATACAAGTTCCCCCGGCCGTTGATGCTCTCACTTGTCATGCTTCTATCTTGCGTCGGCCACCTTCTAATCGCTCTTGGAATCCCAAATTCACTATACTTCGCCTCCGTGATCATCGGATTCTGCTTTGGAGCCATATGGCCATTAATGTTTGCAATCATATCCGAAATTTTCGGACTCAAGTACTACTCAACATTGTACAATTTTGGAGCTGTGGCTAGCCCTGTTGGATCATTCATACTAAATGTGAAAGTAACAGGCTCTTTGTATGATAAAGAAGCTTTGAAGCAATTGGAAATGAAAGGACTAGAAAGAAAAGTTGGACAAGACTTAACTTGTTTAGGAGTACAATGTTATAGGTTGCCATTTTTCATAATCACAGCATCAACATTAGTTGCTTGTTTAGTGTCATTTATTTTGGTCTTGAGGACTAGGGAATTCTATAAAGGTGACATTTATAAGAAGTTTAGGGTGGAAATTCAGACACATGAGGCAGAAATGGGAGCTTCAAAAGGTGAAAATCTTGCAGCCACTACCACAGCCAACATAGATGTGTCACATAATAAAGACAATGTAAAGTGA 1818 0.4092 MVEAEMRKMKKLSYQIVTGRWFMIFASCLIMSVSGATYMFGLYSNEVKSSLGYDQSTLNLISFFKDLGANLGIFSGLINELTPPWVILSIGAAMNFFGYFMVWLSVTGHIAIPHVWQMCLYFYIGANSQSFANTGALVTCVKSFPRSRGSVIGLLKGYVGLSGAIFTQLYHAFYGDDSKALILLIGYLPAVISFLFLPTVRILDIVPQRKELRVFYKLLYISLGVAAFLMLLIVLQNRLSFNRVQYIVDGIFVLLLLLLPLVVVFKEELNIFNNHNNNINHASSSSDFKVVTQVPSPASELSQLESQSQVAPNSNSAISHGGTSCLSNIFKPPSRGEDYTILQALFSIDMLILFIATTFGVGGTLTALDNLGQIGKSLGYPKKSLTTFVSLVSIWNYLGRASSGFASEVFLKKYKFPRPLMLSLVMLLSCVGHLLIALGIPNSLYFASVIIGFCFGAIWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSFILNVKVTGSLYDKEALKQLEMKGLERKVGQDLTCLGVQCYRLPFFIITASTLVACLVSFILVLRTREFYKGDIYKKFRVEIQTHEAEMGASKGENLAATTTANIDVSHNKDNVK* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3032 605 Pfam Nodulin-like 20 265 IPR010658 -
Ahy12g3032 605 Gene3D MFS general substrate transporter like domains 350 561 IPR036259 -
Ahy12g3032 605 PANTHER MFS TRANSPORTER 4 596 - -
Ahy12g3032 605 CDD MFS_Mch1p_like 19 546 - -
Ahy12g3032 605 SUPERFAMILY MFS general substrate transporter 20 558 IPR036259 -
Ahy12g3032 605 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3032 Ahy-Chr12 119853426 119857192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g3032 9 569 Nodulin-like Gene Family AT2G39210 62.278 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3032 - - gmx:100814000 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3032 12 119853426 119857192 Ahy12g3032 12 119853426 119857192 ECH
Ahy12g3032 12 119853426 119857192 Ahy2g2617 2 102255501 102259267 hybridization