Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3013 ATGGACCCCGACATTTCGCGGTGGCTTGCGGAATTCCAACTCCGGAGTTCCGCCCCCGACTCCGTCGTCGCCGACTTCCTTAAGTCCCTTAATCTCTCCAAACCCGATAACAAACTTAAGAAAACCCTCCTCCTCCGCATCCTCCAATCCGAAATCACCAATGCCTCAATCACCGAAGAGGCTCTTGAGGTACTCGAGGAAATTGAAGCCATTGACGGAAACGACGCCGTTCCGCTCCTCGATTTCATGCGCACAGCCTACTGCGCCATCGCCGTCGAATGCACAGTCAAGTACCTCTCCGCCACCTCCGACGGCGTTCCCAGCAAGGAGTACTTAGCCGCCATGGCGCGTATCTGGTTTGGGCGCGTGCTGAAATTGGAACATAGCCGGAGCAAGCTGTTCTCTTACGAGCTTGCACAGTGGATGGAGAACATCGAGGCTGCAGTTGTTGACACCGAGATTTATCAGAGGTTGGCGAAGTTGAATACGCGGTACGATGCGTTTTCCGCGGTTAGGGTTTATCTGCAGAAAGTTTGGGAAACGATGGGACCTTGTTTTCTTGACACGTTAGCGGAAATGACATTTAAGGGCATGAAGAAAGAATCGGCAAGTAGTGTTTTGTTGATGGAGGGTGTGGGGTTGAATGGTGGACATGAGGGGAAGGAACAGTTGGAGGAGAGAGCTGAAGGTTCTGTTGATGGAACCCAGGAGCCTGCAAAGGGGGAAAAGGCAAGCCAGAAAGGTGATCCTCAACTTAAACGCAAGCTCCCTGCATTTCTTAGATGCCATAGAGGAGTTAATAAATCTATTGCTGAGGAATTGGGAACAGAACATTCAGGGAGCAAAAATGGTACCGAGTTTAGTGCTGAAGTTAAAGTAGCTGAGGAATCTCTTCCTGAGGCATTGAATGTATCTGATGCTGTTGGATTGAAACTTGCACAGAAAGGTACAAATCAAGAAGGACCCATGGAAAACATGAGTGTGGATGTAGATGTGCCCAACTTAAATACTTCCAGGGCTATTGTTCTTTTTCAACCTAACAATGCCGATCATGAGAAGAAGTCTTCTGTTCATCATAGTAGAGTTCAAGTTCAGTGTCCCAATTTAATGGAGGAGAACAATACTGCTCATGAAAGCTCCAATTTGATGGAGCAAAACAGCACTGCTCAAGAAATCCCCAATTTGATGGAGCAGAACAGCACTGCTCATGAAATCCCCAATTTGATGGAGCAGAACGGCAGTGCTCATGAAATCCCCAATTTGATGGAGCAGAACAGCACTGCTCATGAAAGCCCCAATTCGATGGAGAAGAACAGTACTACTCGTAGGTATAAGAGGGATAATTCAAAAGATAATCCTACTGGAGTGCAACTAAGAAGGAAGCAAAGAAGATGGTCTCCAATGGAAGAGGACGCACTAAGAATTGGTGTGGAAAAGTTTGGCTCAGGAAACTGGAAAGCAATTCTGAGTTTTTACAGTAACATATTTCAAGATAGAAAAGCAATTGATTTGAAGGACAAGTGGAGAAATCTGATGCGGTAA 1542 0.4669 MDPDISRWLAEFQLRSSAPDSVVADFLKSLNLSKPDNKLKKTLLLRILQSEITNASITEEALEVLEEIEAIDGNDAVPLLDFMRTAYCAIAVECTVKYLSATSDGVPSKEYLAAMARIWFGRVLKLEHSRSKLFSYELAQWMENIEAAVVDTEIYQRLAKLNTRYDAFSAVRVYLQKVWETMGPCFLDTLAEMTFKGMKKESASSVLLMEGVGLNGGHEGKEQLEERAEGSVDGTQEPAKGEKASQKGDPQLKRKLPAFLRCHRGVNKSIAEELGTEHSGSKNGTEFSAEVKVAEESLPEALNVSDAVGLKLAQKGTNQEGPMENMSVDVDVPNLNTSRAIVLFQPNNADHEKKSSVHHSRVQVQCPNLMEENNTAHESSNLMEQNSTAQEIPNLMEQNSTAHEIPNLMEQNGSAHEIPNLMEQNSTAHESPNSMEKNSTTRRYKRDNSKDNPTGVQLRRKQRRWSPMEEDALRIGVEKFGSGNWKAILSFYSNIFQDRKAIDLKDKWRNLMR* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3013 513 ProSiteProfiles Myb-like domain profile. 457 512 IPR001005 -
Ahy12g3013 513 Gene3D - 456 513 - -
Ahy12g3013 513 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 459 513 IPR017930 -
Ahy12g3013 513 MobiDBLite consensus disorder prediction 216 252 - -
Ahy12g3013 513 PANTHER MYB TRANSCRIPTION FACTOR 1 513 - -
Ahy12g3013 513 SUPERFAMILY Homeodomain-like 459 512 IPR009057 -
Ahy12g3013 513 SMART sant 461 513 IPR001005 -
Ahy12g3013 513 CDD SANT_TRF 463 513 - -
Ahy12g3013 513 Pfam Myb-like DNA-binding domain 464 511 IPR001005 -
Ahy12g3013 513 MobiDBLite consensus disorder prediction 425 467 - -
Ahy12g3013 513 MobiDBLite consensus disorder prediction 439 467 - -
Ahy12g3013 513 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3013 Ahy-Chr12 119720463 119724762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g3013 391 512 Single Myb Histone (SMH) Gene Family AT1G15720 29.323 1.89e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy12g3013 Myb_DNA-binding 1.30E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3013 - K11111 adu:107476251 999.579