Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3007 ATGGACTCAATGTTGGTTCCTCCATGGCTAGAGAGATTGCTACAAACACCATTTTTCAATGTATGTAGGATTCATGGAGATGCAGCTAGGAGTGAGTGTAACATGTTCTGCCTTGACTGCAATAATAATAATAATAATAACAACAATGGTGATGCTTTTTGCTTCTATTGCCGCTCTTCAAGGCACAAGGATCATCAAGTAATTCAGATAAGAAGATCTTCATACCATGATGTTGTAAGAGTGGTTGAAATTCAGAAAGTGTTGGACATAAGTGGAGTTCAAACATATGTAATCAACAGTGCTAGAGTTCTGTTCTTGAATGAGAGGCCACAACCCAAATCTGGAAAAGGGGTTCCTCACATTTGTGAGATTTGTGGAAGAAGCCTTTTGGACCCTTTTCGTTTCTGTTCTTTGGGATGCAAGCTTGTGGGAATAAAGAGGAATGGGGATGCAAGCTTTGTTTTGGATGATAAGATCAATGAAGCATTAGCAATGGAGGGAATATCATCAAGAAGATCATCAATGTCTTCAAGGAATCATCATCAAGAAGAAGAAGAATTGGGTGAAGGATCACCACAAAACATTTACACTCCTCCACCTCCTTCAAACACAAGAAGAAGAAAAGGCATTCCTCATAGGGCTCCTTTTGGTTCCTAG 657 0.3957 MDSMLVPPWLERLLQTPFFNVCRIHGDAARSECNMFCLDCNNNNNNNNNGDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVVEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVPHICEICGRSLLDPFRFCSLGCKLVGIKRNGDASFVLDDKINEALAMEGISSRRSSMSSRNHHQEEEELGEGSPQNIYTPPPPSNTRRRKGIPHRAPFGS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3007 218 MobiDBLite consensus disorder prediction 169 218 - -
Ahy12g3007 218 Pfam PLATZ transcription factor 71 142 IPR006734 -
Ahy12g3007 218 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 217 - -
Ahy12g3007 218 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3007 Ahy-Chr12 119661602 119663713 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ahy12g3007 PLATZ 6.40E-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3007 - - gmx:100809455 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3007 12 119661602 119663713 Ahy2g2592 2 102063677 102065788 hybridization