Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2999 ATGCAACTCTCTTTGTTCCTCCATCATCACCACCACCCTATGCTCCTTCATAATTATTGCCCTCTTAACTCTCTTCACTTCACAAGGACACAAACAAGACTTTACAATAGGAATTCATATAAGGTACTACCATGCAATTGTTCATATTCTTCTTCTTCTTCCAACAAAGCTGATATAATTACTTCAAAGATTGATGAAGGAAGAAGGGCATTGCTCAGTTGTCTCCTCATCACCACTTTTTCAGTTAGTGGAGTGTATGCATGTGATGATGCTGAAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCAAAAATTCCTGAAACTGATTTTACAACCCTACCTAATGGCTTGAAGTACTATGATTTGAAGGTTGGGCAAGGAGCCGAGGCTGTAAAAGGATCTCGTGTCGCGGTTCACTATGTTGCTAAGTGGAGAGGTATCACATTTATGACTAGTAGACAAGGAATGGGAGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGAGAATCCGAGAGGGGAAATGTTCTCAAAGGGTTGGATTTAGGTGTACAAGGCATGAGAGTGGGAGGCCAGGTGAGAACACATTTTAGGTTGAATTATAATCTGCATGAAGCAATAATTAAGATAGTATTTATTTTTCCCCTGCAGAGATTACTAATTGTTCCTCCAGAACTTGCCTATGGAAAGAAGGGAGTCCAAGAAATACCTCCAAATGCAACAATAGAGTTGGATGTTGAACTGCTTTCAATCAAACAAAGTCCATTCGGGACTGCGGTAAAGATTGTTGAAGGTTAA 801 0.407 MQLSLFLHHHHHPMLLHNYCPLNSLHFTRTQTRLYNRNSYKVLPCNCSYSSSSSNKADIITSKIDEGRRALLSCLLITTFSVSGVYACDDAEAVSTSRRALRGAKIPETDFTTLPNGLKYYDLKVGQGAEAVKGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESERGNVLKGLDLGVQGMRVGGQVRTHFRLNYNLHEAIIKIVFIFPLQRLLIVPPELAYGKKGVQEIPPNATIELDVELLSIKQSPFGTAVKIVEG* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2999 266 Gene3D - 90 260 IPR046357 GO:0003755
Ahy12g2999 266 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 6 193 - -
Ahy12g2999 266 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 218 266 - -
Ahy12g2999 266 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 130 196 IPR001179 GO:0003755
Ahy12g2999 266 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 218 250 IPR001179 GO:0003755
Ahy12g2999 266 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 6 193 - -
Ahy12g2999 266 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 134 253 IPR001179 GO:0003755
Ahy12g2999 266 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 218 266 - -
Ahy12g2999 266 SUPERFAMILY FKBP-like 131 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2999 Ahy-Chr12 119612722 119615054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2999 134 251 Calmodulin-binding Proteins AT5G48570 34.167 6.42e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2999 - - gmx:100815603 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2999 12 119612722 119615054 Ahy12g2999 12 119612722 119615054 ECH
Ahy12g2999 12 119612722 119615054 Ahy2g2584 2 102014797 102017129 hybridization