Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2989 ATGGAATCCAACAATGAACTAGGTAGTGGCATGTTCTCTGTCATAGGTTCTAGTTTCTTAGGATTAGATCATAATAATAATAATAATAATAATAATAATAATAATAATAACCCTTCACAACAACAACAAAATCTTCAACATAGAAACCAACCCAAAATGGTTCAGTTTGGTTCTTCTTCTTCTTCTTCTCATCACCAACAAATCAATTATGATAATAATAATAATTCATCCAAGAACAAACACCAACAAGGTTCTCTAAGTGATGAAGATGAACAAGGATTCAATAATATAGATGTTGATGAGAGTAATAGTAACAAGATGAAGAACATTAGTAGTAGTATCTCACCATGGCAGAGAATGAAATGGACTAGTACCATGGTTAGGCTCTTGATAATGGCTGTTTACTACATTGGTGATGAAGTTGGCGGCGGCGGCGGCAGTAGTGGTGGTGGTTCATCAGAAACAAGTACTGATCCAAATGGGAAGAAAAAGATGATGATGAACAAGCAAGGAGGGGGGTTGATTCTTCAGAACAAGAAAGGGAAGTGGAAATCAGTGTCAAGAGCAATGATGGAGAAAGGTTTCTATGTTTCACCTCAACAATGTGAGGACAAGTTCAATGATCTGAACAAGAGGTACAAGAGGGTCAATGATGTTCTTGGAAGAGTAACAGCTTGCAAGGTTGTTGAGAATCAAAAGTTGTTGGAAACAATGGATCACTTGTCACCAAAGGCCAAAGAAGAAGTGAGAAAGTTGCTGAATTCAAAGCACCTTTTCTTTAGAGAAATGTGTGCTTATCATAATAGTTTTGGCCATGGTGGTGATAATGCATCTCAATCTCAATTACAACATGAACAAGGAGAGAAAGAAAAGGAAGAAAGATGCTTTCATTCTTCTTCTAAGTTGAAAATAGGGTGTGAAGAAGAGGATCATAATGATGATAGTGGTGACGACGACGATGACGACGATTCTGAGAACTATTTTGATGAGGATGAAGATGAATTAGGAGAAGGTGGTTCAAAGGGTCATCATGATCATCATCATGATCATAATAAGAGGCAAAAGAAATCATCATCATGTGAATTGATGAAAGAATTGAGCAATGAGGTGAATGGTGTTTTGGAAGATAAGGGAAAGAGTGTTTTGGAGAAGAAGCAATGGTTAAGGAGTAAGATAGTGAAGTTAGAGGAGAAGCAAATAAGGCATGAGGGACAAGGGTTTGAGATTGAGAAAGAAAGAATGAAATGGAGAAAGTATAGTAGCAAGAAGGAGAGGGAGATGGAGAGAGCAAAGTTTGAGAATCAAAGGAGAAGGTTAGAGATTGAGAGAATGATTTTGATCATTCACCAAAAGGAACTTGAATTGCAACATCAACAGCATCAATAG 1386 0.3701 MESNNELGSGMFSVIGSSFLGLDHNNNNNNNNNNNNNPSQQQQNLQHRNQPKMVQFGSSSSSSHHQQINYDNNNNSSKNKHQQGSLSDEDEQGFNNIDVDESNSNKMKNISSSISPWQRMKWTSTMVRLLIMAVYYIGDEVGGGGGSSGGGSSETSTDPNGKKKMMMNKQGGGLILQNKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDVLGRVTACKVVENQKLLETMDHLSPKAKEEVRKLLNSKHLFFREMCAYHNSFGHGGDNASQSQLQHEQGEKEKEERCFHSSSKLKIGCEEEDHNDDSGDDDDDDDSENYFDEDEDELGEGGSKGHHDHHHDHNKRQKKSSSCELMKELSNEVNGVLEDKGKSVLEKKQWLRSKIVKLEEKQIRHEGQGFEIEKERMKWRKYSSKKEREMERAKFENQRRRLEIERMILIIHQKELELQHQQHQ* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2989 461 Pfam Myb/SANT-like DNA-binding domain 119 265 IPR044822 -
Ahy12g2989 461 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 13 460 - -
Ahy12g2989 461 PANTHER F16F4.11 PROTEIN-RELATED 13 460 - -
Ahy12g2989 461 MobiDBLite consensus disorder prediction 148 163 - -
Ahy12g2989 461 Coils Coil 422 442 - -
Ahy12g2989 461 MobiDBLite consensus disorder prediction 143 165 - -
Ahy12g2989 461 MobiDBLite consensus disorder prediction 275 359 - -
Ahy12g2989 461 MobiDBLite consensus disorder prediction 284 310 - -
Ahy12g2989 461 MobiDBLite consensus disorder prediction 311 335 - -
Ahy12g2989 461 MobiDBLite consensus disorder prediction 21 113 - -
Ahy12g2989 461 Gene3D - 122 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2989 Ahy-Chr12 119509615 119512334 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy12g2989 Myb_DNA-bind_4 9.30E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2989 - - ahf:112728885 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2989 12 119509615 119512334 Ahy2g2574 2 101911690 101914409 hybridization
Ahy6g1539 6 54157909 54160117 Ahy12g2989 12 119509615 119512334 PCT
Ahy12g2989 12 119509615 119512334 Ahy6g1539 6 54157909 54160117 PCT