Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2978 ATGAAAAAACCAAACGAGGAACCAAAGGGTAAAGCTCCAGCACCTGATTCTCCTTCTGATATTGAGCAGCTGGGGATGTCCACAACAGGGTTCTCTCCTTTGGAGTTTAGTTCTCAACCATTCTCATCAGCTTTTGATGACTCTTTTGACATTATTGATGATACCTCTTTCATGGAGTTTGAATCATTCTCAACAGCTATGAACCATCCACCACCACAACCACCATCTACAACTACAACAATAACCACCACCACTGGGGCTGTTGGGCCATTGCCTCAGCCATTGGAGTGCTTGCACGGGAATCCTGTTCCACCCTTTTTGTCTAAAACCTTCGACCTTGTGGATGACCCTTCTTTGGATCCTATCATCTCATGGGGCTCCACTGGTGCTAGCTTCGTTGTGTGGGACCCTATGGAGTTTTCAAGGCTCGTGTTGCCTCGGAATTTCAAGCACAACAATTTCTCCAGTTTTGTTCGCCAGCTGAATACTTACGGATTCCGCAAGATTGACACTGACAAGTGGGAGTTTTTCAATGAAGCTTTCCAGCGAGGGAAGAAACATTTACTGAAGAACATCCAACGGCGCAGGTCAACTCAATCGCAGCAAGTTGGTAGCCACATTGGAACTTCTATTGATGCTGGGAGACCTGGACTCGAGGTTGAAATAGAGCTACTGAGGAAGGAGAGAAGTATGTTAATGCAAGAGGTGGTTGATTTGCAGCAACAACAGCGAAGAACGGTTCACCATGCTGGAGAAGTGAATCAGAGACTAGAATCTGCAGAGCAAAGGCAGAAACAAATGGTTTCCTTCTTGGCCAAGTTATTTCAGAATCCGGCCTTCTTGGCTCGCCTTAGGGATAAGAAGGAACAAAGACAGATAGAATCTCCAAAAGCAAGAAGGAAGTTTATCAAGCATCAACACGAAGCAGGAAATTCCGAAACTCCCAAAGGTCAGTCTCCTCAATATCTCTCACAGGACTTGGCAAGAGAAATTTCTGTTGGTGCAGAAAATCTGACTTTGCAGTTGGACAAAATCATGTCAGATGAATTGGGTGCATTGCATGAGGCCATGCCAACTCCAGGAATTGTTGGAGAAGGATCATCAAGCTATGGACTTGAAGATCCTCTTTCCGAAGGGAAAAATGCCTTCAACCCAAGTCAAGATGTTCTTTCAGAATACTTTGTTTCCTTCCCGGACGAGTTGTCAAGGGAAAGAGAGTTTCCTGTGTTTCCCCCTGTTGGAACTGAAGGCATTATCAAACAAGAAGATGCATGGGACCCTGCCTTCAATGCTAGTGTTGCTGCTTCAAGTTGTGGGAATGAGCTGTGGGGTAATCCTGTCAACCATGGCGTACCAGAATTCGGAGGCACTAGTGGCGTGTCCGACATATGGGATATCGGCTCAGGAAGTTTAGGAATTGATAAGTGGCCAGCTGATGAATCTCCAATGGATAAAAAGGAGAGTCAAGGTGGCCAGCCAGAAGATGATAGACCTTAA 1497 0.4569 MKKPNEEPKGKAPAPDSPSDIEQLGMSTTGFSPLEFSSQPFSSAFDDSFDIIDDTSFMEFESFSTAMNHPPPQPPSTTTTITTTTGAVGPLPQPLECLHGNPVPPFLSKTFDLVDDPSLDPIISWGSTGASFVVWDPMEFSRLVLPRNFKHNNFSSFVRQLNTYGFRKIDTDKWEFFNEAFQRGKKHLLKNIQRRRSTQSQQVGSHIGTSIDAGRPGLEVEIELLRKERSMLMQEVVDLQQQQRRTVHHAGEVNQRLESAEQRQKQMVSFLAKLFQNPAFLARLRDKKEQRQIESPKARRKFIKHQHEAGNSETPKGQSPQYLSQDLAREISVGAENLTLQLDKIMSDELGALHEAMPTPGIVGEGSSSYGLEDPLSEGKNAFNPSQDVLSEYFVSFPDELSREREFPVFPPVGTEGIIKQEDAWDPAFNASVAASSCGNELWGNPVNHGVPEFGGTSGVSDIWDIGSGSLGIDKWPADESPMDKKESQGGQPEDDRP* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2978 498 MobiDBLite consensus disorder prediction 1 35 - -
Ahy12g2978 498 Coils Coil 222 242 - -
Ahy12g2978 498 MobiDBLite consensus disorder prediction 286 322 - -
Ahy12g2978 498 Pfam HSF-type DNA-binding 106 195 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy12g2978 498 MobiDBLite consensus disorder prediction 21 35 - -
Ahy12g2978 498 MobiDBLite consensus disorder prediction 471 498 - -
Ahy12g2978 498 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-3 93 495 - -
Ahy12g2978 498 Gene3D - 98 196 IPR036388 -
Ahy12g2978 498 MobiDBLite consensus disorder prediction 286 311 - -
Ahy12g2978 498 ProSitePatterns HSF-type DNA-binding domain signature. 145 169 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy12g2978 498 SMART hsfneu3 102 195 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy12g2978 498 SUPERFAMILY "Winged helix" DNA-binding domain 101 195 IPR036390 -
Ahy12g2978 498 MobiDBLite consensus disorder prediction 478 498 - -
Ahy12g2978 498 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 93 495 IPR027725 -
Ahy12g2978 498 PRINTS Heat shock factor (HSF) domain signature 106 129 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy12g2978 498 PRINTS Heat shock factor (HSF) domain signature 157 169 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy12g2978 498 PRINTS Heat shock factor (HSF) domain signature 144 156 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2978 Ahy-Chr12 119369092 119372313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2978 81 484 HSF AT5G03720 49.415 8.61e-111 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy12g2978 HSF_DNA-bind 1.30E-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2978 K09419 - gmx:100780835 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2978 12 119369092 119372313 Ahy12g2978 12 119369092 119372313 ECH
Ahy12g2978 12 119369092 119372313 Ahy2g2563 2 101771167 101774388 hybridization