Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2958 ATGGAGTTACCCAAGCAACTCTTTTTCTTCTTCCTCACACTTATATTTCTCTCAGGACATATAGGGTTGCAAGCTGAGGCAAGGGTGCGACATTATGGTCCAACAAAGTTGTTTGTTTTCGGAGATTCATATGTTGATGCTGGGAACACAAGAAAAGATCAACCGGGTTCATGGAAACAGCCTTATGGCATCACCTTTCCCGGTAAACCCGCCGGAAGATTCTCCGACGGCAGAGTTTTCTCCGATTACATTGCCAAGTATTTGGGGTTGAAATCACCAGTGCCATACAACTTGAGAAAAATGATGCCAAATAATTTGAAATATGGAATGAATTTTGCTTATGGTGGCACAGGTGTCTTCAACACAACATCTAAAAATCCAAATATGACAATCCAAATTGATTTCTTTGAAAAACTCATCAAAGAAAATGTGTACACTGCCTCTGATCTCAGCAACTCCATTGCATATGTCTCTGTTGCTGGAAATGACTACAATTATTACCTTACCATAAATGGCTCTATCCAGGGTTTTCCATCATTCATTGCCTCAGTGATTAATCAAACTACCAAAGACCTAATCCGAATCAAGAACTTGGGAGTGAAAAAAGTTGCAATTGGTGGCCTACAACCACTTGGATGCCTCCCTCTAATCACATCAACATCTTCATTCCAAAAATGCAATGAAACCTTCAACAACCTTGTTGCTATCCACAACAACCTCTTGAACCAATCCATAACCGAACTGAAACAAAGTTACAAGGGTGGTTTCTTAATCATTGACCTCTTTGACTCTTTTACCTCAGTCCTTAACCACCCTAAAACCTACAACCTTCACAATGAGTTAATCCCATGTTGCTTAGGAACAAGCCAAGGTTTTACTTGTGGAGATGTTGATAACAACAATGTGAAGAAGTATAAGGTTTGTGAAAACCCTAAAACAGCTTTCTTTTGGGACCTTTTTCACCCTACACAAGCTGGTTGGCATGTGGTTTATAACAAGTTACAAAACATGAATGCTCTTTCTCAACTTCGGAACTAG 1038 0.3969 MELPKQLFFFFLTLIFLSGHIGLQAEARVRHYGPTKLFVFGDSYVDAGNTRKDQPGSWKQPYGITFPGKPAGRFSDGRVFSDYIAKYLGLKSPVPYNLRKMMPNNLKYGMNFAYGGTGVFNTTSKNPNMTIQIDFFEKLIKENVYTASDLSNSIAYVSVAGNDYNYYLTINGSIQGFPSFIASVINQTTKDLIRIKNLGVKKVAIGGLQPLGCLPLITSTSSFQKCNETFNNLVAIHNNLLNQSITELKQSYKGGFLIIDLFDSFTSVLNHPKTYNLHNELIPCCLGTSQGFTCGDVDNNNVKKYKVCENPKTAFFWDLFHPTQAGWHVVYNKLQNMNALSQLRN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2958 345 SUPERFAMILY SGNH hydrolase 33 335 - -
Ahy12g2958 345 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 343 - -
Ahy12g2958 345 Pfam GDSL-like Lipase/Acylhydrolase 37 333 IPR001087 GO:0016788
Ahy12g2958 345 PANTHER OSJNBB0059K02.9 PROTEIN 7 343 - -
Ahy12g2958 345 CDD SGNH_plant_lipase_like 37 334 IPR035669 -
Ahy12g2958 345 Gene3D SGNH hydrolase 31 342 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2958 Ahy-Chr12 119200746 119205562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2958 37 325 Acyl Lipid Metabolism Gene Families AT4G10950 28.527 4.96e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2958 - - gmx:100800932 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2958 12 119200746 119205562 Ahy2g2543 2 101602821 101607637 hybridization
Ahy16g1850 16 95431142 95444238 Ahy12g2958 12 119200746 119205562 PCT
Ahy6g1610 6 68853419 68860264 Ahy12g2958 12 119200746 119205562 PCT