Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2885 ATGTCGCAACTGAACGGCGCATATTACGGCCCTTCCATACCTCCGCCGCAACACAAACGTCACTACCGTGGCGATGGCGGCGGCAGCAACTGCTGCTGCTGCTGCGGAATCTTCCGCTGCTGCTGCGGCTGCATTTTTGACTGCATCTTCGGCCTCATCTGCAAGATCTTAACCACACTTCTCATCCTTCTCATCATCGTAGCCGTTCTTCTCTACTTCATCGTACGGCCAAATCTCGTCAAGTTCCACGTCAGCAACGCCGTCCTCACTCAGTTCAATTTCTCCTCCGACGCCGCCGCCACCAACAACAACACGCTCCACTACAACCTCATGCTAAACTTCACGATCCGAAACCCTAACAAGCGCGTGGGAATCTACTACGACTACATCGAGGCGCGTGGATTCTACCACGACGTTGGCTTCGGTAACGTCACTATGCAACCGTTTTTTCAGGGAACGAAGAACACGACGGTGGTTGCGACGACTCTCAAGGGTGAGAATGAGGTGGTTTTGGGATCGGATAAAGGATCCAAGGTGGAGGAAGAACGAGGATCTGGTGTTTATGGCATTGATTTGAAGGTGTTCATGAAAGTGAGGTTTAAGTTTTGGTTTATGAAAACTGGGAAGGTGAAACCCAAGGCTATTTGTGTGTTGAAGGTTCCGTTGATGACGAGATCGAAGAATGGAACTTTTACGGCGGAGCACGGCGGCGCGTTTCAAGATACCGCGTGCGACTGGGGTTACCGGTGGTTGTGGTTTCATCATTAG 768 0.5143 MSQLNGAYYGPSIPPPQHKRHYRGDGGGSNCCCCCGIFRCCCGCIFDCIFGLICKILTTLLILLIIVAVLLYFIVRPNLVKFHVSNAVLTQFNFSSDAAATNNNTLHYNLMLNFTIRNPNKRVGIYYDYIEARGFYHDVGFGNVTMQPFFQGTKNTTVVATTLKGENEVVLGSDKGSKVEEERGSGVYGIDLKVFMKVRFKFWFMKTGKVKPKAICVLKVPLMTRSKNGTFTAEHGGAFQDTACDWGYRWLWFHH* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2885 255 Pfam Late embryogenesis abundant protein 114 212 IPR004864 -
Ahy12g2885 255 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 249 - -
Ahy12g2885 255 PANTHER OS05G0367900 PROTEIN 18 249 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2885 Ahy-Chr12 118586805 118587944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2885 74 230 SNARE and Associated Proteins AT1G32270 38.217 1.43e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2885 - - aprc:113873272 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2885 12 118586805 118587944 Ahy12g2885 12 118586805 118587944 ECH
Ahy12g2885 12 118586805 118587944 Ahy2g2472 2 100989033 100989800 hybridization