Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2883 ATGGCTGAAAATAAGCAATCCCAATTGAATGGCTCATACTATGGCCCTTCAATTCCTCCAAATAATAACCGTAGAAGAAGAAATTGTTGTTGCCGCATTTTCAACATCTTTTGGAAGATTCTACTATCAATCATAACCCTAATTGTTCTTTTATTCATCATATCCCTTGTCATAGTTCAACCAAGACCCTTCAAATTCTCTGTCACACAAGCAAATCTCACACAATTCAACTACACTAGCACTAATACATTGTTACATTACAAACTTGTACTAAATTTCACTTCACATAACCCAAACAAAAAGCTTGCAATCTACTATGACAAAGTTGAGGGCAATGTGTTCTACCAAGGTTCTAGATTCTCCACAATTGATGTCATCACATGGCTGAATTCTTTCAGACAAGATTCTAACCACACGGATAGGATGAGTGGTGTGTTCAAGGGGACAAAAGTTTTGGTTCTTGATCAAAGTCAACGCTCTAAGTTTGACCAAGACAAGAGAGATGGGGATTTCGATATTTATGTGAAGTTGCATTTTGACATAAGGTTTAGGCTTGGTGATTTTATATTTAATAATATTAACTCAAAAGCTACGGTTAAGTGTGGGATTAAGGTTCCTTTGAGTGATTCTAATGGGAAAGTGGTAGGTGCTAGATTTGAGCCCAAGAAGTGCAATGTTGATATCAAGTGGGTTTAG 696 0.3664 MAENKQSQLNGSYYGPSIPPNNNRRRRNCCCRIFNIFWKILLSIITLIVLLFIISLVIVQPRPFKFSVTQANLTQFNYTSTNTLLHYKLVLNFTSHNPNKKLAIYYDKVEGNVFYQGSRFSTIDVITWLNSFRQDSNHTDRMSGVFKGTKVLVLDQSQRSKFDQDKRDGDFDIYVKLHFDIRFRLGDFIFNNINSKATVKCGIKVPLSDSNGKVVGARFEPKKCNVDIKWV* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2883 231 PANTHER OS05G0367900 PROTEIN 18 226 IPR044839 GO:0098542
Ahy12g2883 231 Pfam Late embryogenesis abundant protein 93 201 IPR004864 -
Ahy12g2883 231 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2883 Ahy-Chr12 118581058 118582101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2883 58 217 SNARE and Associated Proteins AT1G32270 30.000 1.80e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2883 - - gmx:100794249 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2883 12 118581058 118582101 Ahy2g2470 2 100983133 100984176 hybridization