Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2835 ATGGCTGAAAAACTTTATGGTGGAGCTTACCTCTCTCCCTTTGTTGATGCTGTTTTGGACAACCTGACTTCAATACTTGAAGAAGACGACTCTTTCCTCAAAAGGAACAACTTGCTTGGAAGGTTGCAGAATTATCTGTATGATGTTGCACCTGTTCTTGATGATGCTGAGCTGAAGCAGTTCAGTGACAAGAAAGTCAAGAAGTGGCTTGTTGATCTTCAAGATGCTCTCTTTATGGCTGATGACTTGCTCGACGAACTCTCCACTAAAGCCGCTATTGCTGCCGCTCAAAGGGATCCAAGTAACTCTTCCTCCTGGTCTTGCCTTGTTGATTCATATATAGAAGATACTGGTGACATCGAAAACATAGTTCGAAGACTAGAGTCTGTTGTAGCACGCAAGAATTATCTTCGTCTGAAGGAGAGTGCCAAGGTGGACATGTCATGGAGAATTCCATCCACATGTCTTGTTGAACCATCGGAGATATGTGGCAGGAAAGAAGACAAGGAGGCCATACTCAAACTGTTGTTGGATGATGATGATGCTGCTGATGGTGATTTATCTGTCATTCCCATTGTGGGCATGGGCGGAATAGGAAAGACTACTTTGGCCCAATTGCTTTACCACGATGACAAAGTGAAGGAGAATTTTGATTTACGAGGATGGGTTTGTGTGTCAGAAGAGTTTGATATTGTCAAGGTCACCAAGACTATAATCGAGGTAATAACTTCGAGTTCTTGTAACTTGACAGATTTGAATTTACTTCAGCTTGATTTAAAGGAAAAGTTGTCGAGGCAAAAGTTCTTCATTGTCTTGGACGACGTATGGAATGAAAATTATAGTGATTGGGATAAGCTTCTAAAACCTTTTCAAAAAGGGGTTAAGGGAAGTAAAATTCTAATAACCACTAGAAACAAAAAAGTAGCTTCTTTAGTGCAGACTGTTTCACCTCATGAACTAAGATCATTGTCCGATGAAGATTGTTGGTTGGTGTTTACAAAGCATGCACGTCTGTCAACTGTTTCTGTGGATAATCCAACCCTGGAAAAAATCGGCAGAGATATCGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGCATATTGCGTGGAAATTCTGATATCAGAAATTGGAATCATTTACTGAAGAGTGAAATCTGGGAACTCTCCAATGACAGAATAAATGTTGTTCCAGCGTTAAAGATAAGTTATTATTTTCTTCCTTCATATTTGAAACAGTGCTTTGTTTATTGTTCCTTGTATCCCAAGGACTATGAATTTAGCAAGGATGAATTGATGCTGTTATGGATGGCAGAGAATTTTTTGCAACCAGTAGAAAAAAAGACTATGGAAGAAGTTGGTGGTGAATATTTTGATGAATTAATTGCGAGATCATTTTTGCAACCTCATAGTACTTGGCGAAATAAATTTGTGATGCATGATCTTGTTCATGATTTAGCAATGACATGTGCTGGAGAATTCTATTTCAGAGCTGAAGAGGTTCGGAATGCAGTTGAGGTTGATATTAAAGCTCGTCATTTGTCACATAATGCCAAAGGCAATTACCCAATGTCAAAAGTTTTGGGAGTTTGCGATGCAATAAAACATACAAGGACATTTCTTGAAATCAATTTGGGGTCAGAGATCCCATTTAACATGGAAAATGCACCTTGCATCATGTTGTCACAGTTGAAGTACCTGAGAGCTTTGTCATTTGAAAGCTTTCCTCTTGAGTCAGTACCTGATTCAATAGGTGAGTTGATTCATCTGCGTTACTTGGATCTGTCCAAGACCAACATTGTGGCATTGCCAGAGTCATTGGGTAACCTTTACAATTTGCAGACTTTGAAGTTGTATTCCTGTAGCAATCTGAAAATGCTACCTGTTGGCATGAAAGATCTTGTAAATTTGCGCCATCTTGATATTAGAGGGACTAAGTTACGTGAGATGCCGAAAGGCATGAGCAAATTAAGAAGTTTGCAGTTTTTAAGTAATTATTTTGTTGGAAAGCATGAAGAAAACAAGATTAAAGAATTGGGAGCACTCGTAGATCTACACCAATCTATTTCCATTAAAGAGTTGGAGAATGTGGTCAACAGCAATGAAGCTTCGATGGCAGGAATGTTTGATAAGGATGGCATTGATTTTATGACGTTAAGTTGGTCGAGGAATAAAGACGAGAATACAGTTGATTCCCAAATGGAAAGAGACATACTTGACAAGTTACAACCTCACACTAATTTGAAAGAGTTAGAGATCAATGGTTACAGGGGTACAACATTTCCAGATTGGGTGGGACATTCTTCCTACCACAACATCACCAAAATAACACTTATTCGTTGCAGGAGTTGCTGTATGCTTCCTTCATTTGGACAGTTGCCCTCGTTGAAGCACCTATCAATTTCACATTTTAAAAGTCTGGAAAGTGTGGGTGCTGAGTTTTACTTTAACCAGAATGGTGAATCTTGTTTGGAGACACCACCATTCCCAATGCTTGAAACTCTTTCGTTTTATTTAATGCCTTGCTGGAAGGAGTGGCGTTCATTAGAGTTCAATGGGTTTCCGAGACTTAGGGAGCTTACCATATTTGGCTGTCCGATGTTGAGAGGAGATTTGCCCATTCATCTACCATCTTTGCAATCACTTCAGATTAGCCATTGCAAGCAGCTGAGTTGTTGTGTTCCAAGGGCACCTGCGATTACCAGTCTTTCAATTCAAGGAAAGCGTCTAGTGGGGTCCGTGGTGGAGGCCATTACGAACACGCAACTGAGTTGCCTCACTTCTTTATGCATCTCAGATTGTTCCTCCCACATTTGGTTTCCTGTGAGTGCTATTCCC 2850 0.4021 MAEKLYGGAYLSPFVDAVLDNLTSILEEDDSFLKRNNLLGRLQNYLYDVAPVLDDAELKQFSDKKVKKWLVDLQDALFMADDLLDELSTKAAIAAAQRDPSNSSSWSCLVDSYIEDTGDIENIVRRLESVVARKNYLRLKESAKVDMSWRIPSTCLVEPSEICGRKEDKEAILKLLLDDDDAADGDLSVIPIVGMGGIGKTTLAQLLYHDDKVKENFDLRGWVCVSEEFDIVKVTKTIIEVITSSSCNLTDLNLLQLDLKEKLSRQKFFIVLDDVWNENYSDWDKLLKPFQKGVKGSKILITTRNKKVASLVQTVSPHELRSLSDEDCWLVFTKHARLSTVSVDNPTLEKIGRDIVKKCDGLPLAAQALGGILRGNSDIRNWNHLLKSEIWELSNDRINVVPALKISYYFLPSYLKQCFVYCSLYPKDYEFSKDELMLLWMAENFLQPVEKKTMEEVGGEYFDELIARSFLQPHSTWRNKFVMHDLVHDLAMTCAGEFYFRAEEVRNAVEVDIKARHLSHNAKGNYPMSKVLGVCDAIKHTRTFLEINLGSEIPFNMENAPCIMLSQLKYLRALSFESFPLESVPDSIGELIHLRYLDLSKTNIVALPESLGNLYNLQTLKLYSCSNLKMLPVGMKDLVNLRHLDIRGTKLREMPKGMSKLRSLQFLSNYFVGKHEENKIKELGALVDLHQSISIKELENVVNSNEASMAGMFDKDGIDFMTLSWSRNKDENTVDSQMERDILDKLQPHTNLKELEINGYRGTTFPDWVGHSSYHNITKITLIRCRSCCMLPSFGQLPSLKHLSISHFKSLESVGAEFYFNQNGESCLETPPFPMLETLSFYLMPCWKEWRSLEFNGFPRLRELTIFGCPMLRGDLPIHLPSLQSLQISHCKQLSCCVPRAPAITSLSIQGKRLVGSVVEAITNTQLSCLTSLCISDCSSHIWFPVSAIP 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2835 950 Pfam NB-ARC domain 166 388 IPR002182 GO:0043531
Ahy12g2835 950 Gene3D - 322 406 IPR042197 -
Ahy12g2835 950 PANTHER DISEASE RESISTANCE PROTEIN RP 32 938 IPR044974 GO:0006952
Ahy12g2835 950 Pfam Rx N-terminal domain 14 94 IPR041118 -
Ahy12g2835 950 Gene3D - 15 123 - -
Ahy12g2835 950 SMART LRR_typ_2 638 661 IPR003591 -
Ahy12g2835 950 SMART LRR_typ_2 591 614 IPR003591 -
Ahy12g2835 950 SUPERFAMILY L domain-like 482 938 - -
Ahy12g2835 950 PRINTS Disease resistance protein signature 878 894 - -
Ahy12g2835 950 PRINTS Disease resistance protein signature 359 373 - -
Ahy12g2835 950 PRINTS Disease resistance protein signature 189 204 - -
Ahy12g2835 950 PRINTS Disease resistance protein signature 262 276 - -
Ahy12g2835 950 Gene3D - 407 493 IPR036388 -
Ahy12g2835 950 PANTHER OS05G0414200 PROTEIN 32 938 - -
Ahy12g2835 950 Gene3D - 147 316 IPR027417 -
Ahy12g2835 950 Gene3D Ribonuclease Inhibitor 534 942 IPR032675 -
Ahy12g2835 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 422 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2835 Ahy-Chr12 117966324 117969489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2835 186 655 WRKY Transcription Factor Family AT5G45050 21.483 4.42e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2835 - - ahf:112728733 1477.61