Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2833 ATGCTCTCTATTTCGCTGATGATTTGCTCGACGAACTCTCCACTAAAGCCGCTATTGCTGCTACTCAAAGGGATCCAGGAGAGTGCCAAGGTGGACATGTCATGGAGAATTCCATCAACATGTCTTGTTGAACCATCGGAGATATGTGGCAGGAAAGAAGACAAGGAGGCCCTACTGAAACTGTTGTTAGATGATGATGCTGCTGCTGATGGTGATTTATCTGTCATTCCCATTGTGGGCATGGGCGGAATAGGAAAGACTACTTTGGCCCAATTGCTTTACCACGATGACAAAGTGAAGGAGAGTTTTGATTTTCGAGGTTGGGTTTGTGTGTCAGAAGAATTTGATGTTGTCAAGGTCACCAAGACTGTAATCGAGGCAATAACTTCAAGCTCTTGTAACTTGACAGATTTGAATTTACTTCAGCTTGATCTAAAGGAAAAGTTGTCGAGGCTAAAGTTCTTCATTGTCTTGGACGACGTATGGAATGAAAATTATAGTGATTGGGATAAGCTTCTAAAACCTTTTCAAAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAACAAAAATGTGGCTTCTTTAGTACAGACTGCTTCACCTCATGAACTAAGATCATTGTCCGATGAAGATTGTTGGTTGGTGTTTACAAAGCATGCACGTCTGTCAACTGTTTCTGTGGAGAATCCAACCCTGGAAAAAATCGGCAGAGATATCGTAAAGAAGTGTGATGGATTGCCCTTGGCAGCTCAAGCCCTTGGAGGCATATTGCGTGGAAATACTGATGTCAGATATTGGAATCATTTACTGAAGAGTGAAATCTGGGAACTCTCCAATGACAAAATAAATGTTGTTCCAGCGTTAAGGATAAGTTATTATTTTCTTCCTTCATATTTGAAGCAGTGCTTTGTTTATTGTTCCTTGTATCCCAAGGACTATGAATTTAGCAAGGATGAATTGATGCTGTTATGGATGGCAGAGGATTTTTTGCAACCAGTAGAAAAAAAGACTATGGAAGAAGTTGGTGGTGAATATTTTGATGAATTAATTGCGAGATCATTTTTGCAACCTCATAGTACCGAGGAAAATAAATTTGTGATGCATGATCTTGTTCATGATTTAGCAATGACATGTGCTGGAGAATTCTATTTCAGAGCTGAAGAGCTTCTGAATGCAGTTGAGATTGATATTAAAGCTCGTCATTTGTCACATAACGCCAAAGGCAATTATCCAATGTCAAATCTTTTGAGAGTTTGTGATAGAGTAAAACATACAAGGACATTTCTTGAAATCAATTTGAAGGAGTGGATTCCATTCAATATGGAAAATGCACCTTGTATCATGTTGTCACAGTTGAAGTACCTGAGAGCTTTGTCGTTCAAAAAGTTTCCTCTTGAGTCAGTGCCTGATTCAATAGGTGAGTTGATTCATCTGCGTTATTTGGATCTCTCTTGGACGGACATCGTGGCATTGCCGGAGTCATTGAGTAACCTGTACAACTTGCAGACCTTGAAGTTGCTTGGCTGTAGAAAGCTGAAAATGCTACCTGTTGGCATGAAAGACCTTGTAAATTTGCGCCATCTTGATATTAGAGTGACTCAGTTACGTGAGATGCCGAAAGGCATGAGCAAGTTGAAAAATTTGCAGTTTTTAAGCGACTATGTTGTTGGGAAGCGTGAAGAGAACAAGATCACAGAACTGGGAGCACTTGCAAATCTACAGCAATCAATTTCCATTTGCGAATTGGAGAATGTGGTGAACGGCAGTGAAGCTTTGATGGCAAGAATGTCTGATAAGGATGGCATTGATTCTATGATGTTGGGTTGGTCGTTTGATGAAGTAGACGAGGATACAGTTGATTCCAAAATGGAAAGAGATATACTTGACAAGTTACGACCTCACACTAATTTGAAACAGTTACAGATCAAGGGTTACAGGGGTACAACATTTCCAGATTGGGTGGGACATTCTTCCTACCACAACATCACCAAGATATCACTGGATGGTTGCAGGAGTTGCTGTATGCTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCACCTGGAAATTTCAGATTTTGAAAGTCTAGAAAGTGTGGGTGCTGAGTTTTACTTTAACCAGAATGGTGAATCTTGTTTGGAGACACCACCATTCCCAATGCTTGAAATTCTTATGTTTGAGGCAATGTGGCGCTGGAAGGAGTGGCGTTCATTGGAGTTCAATGCGTTTCCTCGACTTAGGGAGCTTACCATAAGGAAGTGTCCGATGTTGAGAGGAGATTTGCCGAATCAACTTCCATCTTTGCAATCACTTGAGATTAGGAATTGCAAGCAGCTGAGTTGTTGTGTTCCAAGTGGTCCTGCGATTACCACTCTTTCAATTTCAGGAAAGCATCTAGTGGGGTCTGTGGTGGAGGCCATTACCAACACGCAACTGACTTGCCTCACTTCTTTATCCATCTCAGATTGTTCCTCCCACATATGCTTTCCAGTGAGTGCTATTCCCCCATCACTACAAAAGTTGACGATCGAGAGTTGTGGAGAATTAGAATTCCAAATGGATGGGCAACATCACTCGCTGCAGAAACTATCAATAGAGAACAGCTGTGATTCACTTACATCCTTCTCGTTATTGGATGCCTTTCCAAATCTCGTGCGTGTTCGTATCGCCGATTGCGAAAAGATGGAGTCTCTTGTGGTGTCACGCTCTCTTTCTTGTCTCCGTTATTTATATATCTGCTATTGTGGGAGTTTGAAATCTGTGTCAACGCTATGGGTGGCAGCACGTCAACTAGAGCATCTCACATTACTGGGTTGCCCAGAGGTTGTTGATTTGTCTCCTACAGGGGATGGGGATCCACACCATAGCCTGAGATCTCTTGAAATCAGCTACAGCGAGAAACTGGTGAGCTCTGCAGCATTCATGAATTCGCAATTTCGTGGGCTTACTCATCTTATCATTGATGGTCAATACGGCGAGAGTGTGAAGTCCCTGCCAAAAGAAGGTTGGCTGCCTGCCTCCATTGAGTCTCTCACACTGTTTCGCATTGAAAGTGTGGAGACGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAACATTTAGCCATTACTGAATGTCCCAAGTTGAAAAATATGGAGGGAGAAAAGCTGCCAGCCTCTCTAATACAACTCAACATCATCTGGGGAAGCCCTTTGCTGGGCAAACGATGTCAGATGAAGGATCCACAGCTTTGGCCCAAAATCTCCCACATCCCCGCCATTCAAGTTGATCACAAATGGATTTGA 3297 0.424 MLSISLMICSTNSPLKPLLLLLKGIQESAKVDMSWRIPSTCLVEPSEICGRKEDKEALLKLLLDDDAAADGDLSVIPIVGMGGIGKTTLAQLLYHDDKVKESFDFRGWVCVSEEFDVVKVTKTVIEAITSSSCNLTDLNLLQLDLKEKLSRLKFFIVLDDVWNENYSDWDKLLKPFQKGVKGSKILITTRNKNVASLVQTASPHELRSLSDEDCWLVFTKHARLSTVSVENPTLEKIGRDIVKKCDGLPLAAQALGGILRGNTDVRYWNHLLKSEIWELSNDKINVVPALRISYYFLPSYLKQCFVYCSLYPKDYEFSKDELMLLWMAEDFLQPVEKKTMEEVGGEYFDELIARSFLQPHSTEENKFVMHDLVHDLAMTCAGEFYFRAEELLNAVEIDIKARHLSHNAKGNYPMSNLLRVCDRVKHTRTFLEINLKEWIPFNMENAPCIMLSQLKYLRALSFKKFPLESVPDSIGELIHLRYLDLSWTDIVALPESLSNLYNLQTLKLLGCRKLKMLPVGMKDLVNLRHLDIRVTQLREMPKGMSKLKNLQFLSDYVVGKREENKITELGALANLQQSISICELENVVNGSEALMARMSDKDGIDSMMLGWSFDEVDEDTVDSKMERDILDKLRPHTNLKQLQIKGYRGTTFPDWVGHSSYHNITKISLDGCRSCCMLPSLGQLPSLKHLEISDFESLESVGAEFYFNQNGESCLETPPFPMLEILMFEAMWRWKEWRSLEFNAFPRLRELTIRKCPMLRGDLPNQLPSLQSLEIRNCKQLSCCVPSGPAITTLSISGKHLVGSVVEAITNTQLTCLTSLSISDCSSHICFPVSAIPPSLQKLTIESCGELEFQMDGQHHSLQKLSIENSCDSLTSFSLLDAFPNLVRVRIADCEKMESLVVSRSLSCLRYLYICYCGSLKSVSTLWVAARQLEHLTLLGCPEVVDLSPTGDGDPHHSLRSLEISYSEKLVSSAAFMNSQFRGLTHLIIDGQYGESVKSLPKEGWLPASIESLTLFRIESVETLECKGLAHLTSLQHLAITECPKLKNMEGEKLPASLIQLNIIWGSPLLGKRCQMKDPQLWPKISHIPAIQVDHKWI* 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2833 1098 Gene3D - 34 202 IPR027417 -
Ahy12g2833 1098 Pfam NB-ARC domain 54 273 IPR002182 GO:0043531
Ahy12g2833 1098 Gene3D - 293 379 IPR036388 -
Ahy12g2833 1098 Gene3D Ribonuclease Inhibitor 954 1078 IPR032675 -
Ahy12g2833 1098 Gene3D Ribonuclease Inhibitor 791 951 IPR032675 -
Ahy12g2833 1098 Gene3D Ribonuclease Inhibitor 441 594 IPR032675 -
Ahy12g2833 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 308 IPR027417 -
Ahy12g2833 1098 Gene3D Ribonuclease Inhibitor 604 790 IPR032675 -
Ahy12g2833 1098 PANTHER DISEASE RESISTANCE PROTEIN RP 44 790 IPR044974 GO:0006952
Ahy12g2833 1098 SUPERFAMILY L domain-like 791 1084 - -
Ahy12g2833 1098 PRINTS Disease resistance protein signature 75 90 - -
Ahy12g2833 1098 PRINTS Disease resistance protein signature 245 259 - -
Ahy12g2833 1098 PRINTS Disease resistance protein signature 765 781 - -
Ahy12g2833 1098 PRINTS Disease resistance protein signature 148 162 - -
Ahy12g2833 1098 Gene3D - 208 292 IPR042197 -
Ahy12g2833 1098 SUPERFAMILY L domain-like 368 786 - -
Ahy12g2833 1098 PANTHER - 44 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2833 Ahy-Chr12 117943791 117957545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2833 72 532 WRKY Transcription Factor Family AT5G45050 20.078 1.67e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2833 - - ahf:112728733 1803.1