Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2826 ATGCAAAGAAAAGATGGAATCATGAAGAAAATTTCAACATTTTCAAAGTTATGTAAAGTTGAAGCTTGTCTAATTGTTTATGGAGATGATTCTTCTCGACCAATGACTTGGCCACAAGAACATTCAAAGGTGCAATCCATCATTAAAAAGTACGAGGTTCAAAAGAATAATGAGACACACCCCATAATCTTTGATGAAGAAGAATTTTTCAAGAACAAGAAGATCATGATTGAAGCCGAGATTTCTAAATTGAGAAAGAAGGTATTCAAACTCAAATATCCTACCATGGATCCAATCTTTACTACCTTAGATGGGAACCAATTGATGGAGTTCATTGCTTTGGTGAACACTAAAATTAAAGCTTGTAAGAAAAGAATTGACATGTTGAAGGAGAGTAATCAAGATAATGGTAGCAACTTCAATGTTGACCAAAATCAAAGTCAACTCAATTTCATGAACAACATTTCTAATCATGATTATGCTCTTCATCATGATAATTTGGTATATCAAACTCAAAACCCTAAGTTTGATCCAAATGTTACTTATTTTGTGGCAAAGAACAATGGGATGATCATGGATTCTATTAGCCAAGTTAATGTGTCTCTAGATTGTTCTACTACAAATCAAGTTGCGATTATGAATTCTAAAGAAAAGAATGTTATTGTGGATTCTACAAATCAAATCAGTGAAGATGGTGATCTTATTAATTGGGATGATTTTGTTGAGGTTGAGAATTGGATTGATCAACTTCAATATGAGACTGATTTAAAAGAGATTCTTTCTCATCAATCTCAGAATGTGCCACAATCTTCACAAATCTTGCCACCAATAACAATGGATGGATTTTTGGCTGATGAGAAGAACAATGACCACCAATTTCAACCATTCAACATGTAA 897 0.3289 MQRKDGIMKKISTFSKLCKVEACLIVYGDDSSRPMTWPQEHSKVQSIIKKYEVQKNNETHPIIFDEEEFFKNKKIMIEAEISKLRKKVFKLKYPTMDPIFTTLDGNQLMEFIALVNTKIKACKKRIDMLKESNQDNGSNFNVDQNQSQLNFMNNISNHDYALHHDNLVYQTQNPKFDPNVTYFVAKNNGMIMDSISQVNVSLDCSTTNQVAIMNSKEKNVIVDSTNQISEDGDLINWDDFVEVENWIDQLQYETDLKEILSHQSQNVPQSSQILPPITMDGFLADEKNNDHQFQPFNM* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2826 298 PANTHER PROTEIN, PUTATIVE-RELATED 1 257 - -
Ahy12g2826 298 SUPERFAMILY SRF-like 2 72 IPR036879 GO:0003677|GO:0046983
Ahy12g2826 298 Gene3D - 1 74 IPR036879 GO:0003677|GO:0046983
Ahy12g2826 298 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 3 37 IPR002100 GO:0003677|GO:0046983
Ahy12g2826 298 PANTHER MADS BOX PROTEIN 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2826 Ahy-Chr12 117861927 117862876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2826 1 169 MADS-box Gene Family AT3G18650 26.111 1.50e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Ahy12g2826 SRF-TF 4.80E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2826 - - adu:107476111 565.844