Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2801 ATGGAGAAACCAAATTCAACAACCCTAGCAAGAACAAAATCAGACCAATTAATAGAATCTATGGCGGCGGCTTTAAAATCGCCGCAATCAAGTGACCACTCATCCGGAATGCCAGATAGTGGTGGTGGTGGTGGTGGCAGTGGTACGCTATCAAGGAAGTCGAGCCGGCGGATGATGGTGGCGGCTTCCCCGGGGCGCGGGGGAGGAAAGAACACACACATAAGGAAATCAAGGAGTGCTCAAATAAGCCAAATGAAGTTTGAATTGGATGATTTGAGCAGTGGTGCTGCACTTAGTAGAGCTTCAAGTGCAAGCTTAGGTTTCTCATTCTCTTTCACTGGATTCACTATGCCACCTGATGAAATTGCTGATTCTAAACCCTTCAGTGATGATGATATTCCTGAAGATATTGAAGCTGGAACTAAGACAATAAAGTTTCAAACTGAGCCTACTATTCCCATCTATCTTAAGTTCAAAGATGTGAGCTACAAGGTAGTAATGAAAGGCATGACAACAAGTCATGAAAAGGATATATTGAATGGGATAAGTGGATGTGTGAATCCAGGTGAAGTCTTGGCTTTGATGGGTCCCTCAGGGAGTGGAAAAACCACTCTTTTGAATCTATTAGGTGCTAGAATATGCCACTCCACTATCTCTGGTTCCATCACTTACAATGATCAATCATATTCCAAGTTCTTGAAGAGCAGGATAGGATTTGTGACACAAGATGATGTTCTGTTTCCTCACTTAACTGTCAAAGAAACATTGACATATGCAGCCAGGCTTAGACTTCCAAAGACATACACAAAGGAGCAAAAGGAAAAAAGAGCTCTTGATGTTATCTATGAGCTTGGTTTGGAGAGGTGCCAAGACACAATGATTGGAGGTTCCTTTGTTCGTGGAGTATCAGGTGGAGAAAGGAAGAGAGTTTGTATTGGAAATGAGATCATAATCAACCCTTCTCTTCTTTTTCTTGATGAACCAACTTCTGGTTTGGATTCAACAACAGCATTGAGAATAGTTCAGATGCTTCAAGACATAGCAGAGGCTGGTAAAACAGTAGTGACAACAATTCACCAACCATCAAGTAGACTCTTTCACAAGTTTGACAAGTTGATCCTTCTTGGCAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCTGAAGCAATGAATTACTTCCAATCTATAGGGTGTTCGCCTCTTATTTCGATGAATCCGGCCGAGTTCTTGCTAGACCTTGCCAATGGAAACATAAATGATGTTTCTCTTCCATCAGAGTTGGAGGACAGAGTTCAAATGGGAACTGTAGAATCTGAAAGACATAGTGGCAAGCCATCTCCAGCAGTAGTACATGAGTATTTGGTGGAGGCATATGAGTCTCGTGTCGCGGAAACAGAGAAGAAAAAGATAATGGCTCCTTCCCCTCTTGATGAAGAAGTTAAGTCCAAAGTTCGTAGTTCTAAGAGGGAATGGGGAGCAAGTTGGTATGAGCAATTCTCTATATTGTTCTGGAGAGGAATCAAAGAAAGGAAGCATGATTATTTCAGTTGGTTGAGAATCACACAAGTTCTGTCCACTGCAATCATATTGGGATTACTTTGGTGGCAATCAGATACTAAGAACATAAAAGATCTGCAAGATCAGGCTGGACTGCTCTTCTTTATAGCTGTCTTCTGGGGATTCTTCCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCAATGCTGAGTAAGGAGCGAGCGGCCGATATGTACAGACTAAGTGCATATTTCTTGGCCAGAACCACAAGTGACCTTCCACTAGACTTGATATTACCAGTACTATTTCTCCTTGTTGTTTACTTCATGGCTAGTTTGAGACTCAGTGCTACTCCCTTTGTCCTCACCATCCTCACTGTTTTCCTCTGCATCGTGGCGGCTCAGGGACTTGGACTTGCTATTGGAGCAACACTCATGGATTTGAAAAGGGCAACAACTTTGGCTTCAGTAACTGTCATGACTTTCATGCTGGCTGGAGGGTTCTTTGTGCAGAGAGTTCCCATATTCATTTCTTGGATCCGGTACATGTCTTTCAATTACCACACCTACAAACTGCTGCTAAAGGTGCAATATGAACACCTAACTCCAGTTGTAAATGGGATCAAAATTGACAGTGGTTTGACAGAGGTTGCTGCTCTGATAGCCATGGTTTTCGGCTACCGGTTCTTGGCTTATCTTTCCTTGCGGCGGATGAAGCTTCAATCCGGAGCATGA 2259 0.4285 MEKPNSTTLARTKSDQLIESMAAALKSPQSSDHSSGMPDSGGGGGGSGTLSRKSSRRMMVAASPGRGGGKNTHIRKSRSAQISQMKFELDDLSSGAALSRASSASLGFSFSFTGFTMPPDEIADSKPFSDDDIPEDIEAGTKTIKFQTEPTIPIYLKFKDVSYKVVMKGMTTSHEKDILNGISGCVNPGEVLALMGPSGSGKTTLLNLLGARICHSTISGSITYNDQSYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTYTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMNYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDRVQMGTVESERHSGKPSPAVVHEYLVEAYESRVAETEKKKIMAPSPLDEEVKSKVRSSKREWGASWYEQFSILFWRGIKERKHDYFSWLRITQVLSTAIILGLLWWQSDTKNIKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMASLRLSATPFVLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFISWIRYMSFNYHTYKLLLKVQYEHLTPVVNGIKIDSGLTEVAALIAMVFGYRFLAYLSLRRMKLQSGA* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2801 752 Pfam ABC-2 type transporter 497 706 IPR013525 GO:0016020|GO:0140359
Ahy12g2801 752 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 36 746 - -
Ahy12g2801 752 MobiDBLite consensus disorder prediction 23 37 - -
Ahy12g2801 752 CDD ABCG_EPDR 153 384 - -
Ahy12g2801 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 394 IPR027417 -
Ahy12g2801 752 ProSitePatterns ABC transporters family signature. 302 316 IPR017871 GO:0005524
Ahy12g2801 752 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 746 - -
Ahy12g2801 752 Pfam ABC transporter 179 330 IPR003439 GO:0005524
Ahy12g2801 752 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 156 402 IPR003439 GO:0005524
Ahy12g2801 752 SMART AAA_5 188 379 IPR003593 -
Ahy12g2801 752 MobiDBLite consensus disorder prediction 21 74 - -
Ahy12g2801 752 Gene3D - 155 396 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2801 Ahy-Chr12 117672409 117684650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2801 178 416 Calmodulin-binding Proteins AT2G36910 28.571 3.70e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2801 K05681 - gmx:100798801 1231.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2801 12 117672409 117684650 Ahy12g2801 12 117672409 117684650 ECH
Ahy12g2801 12 117672409 117684650 Ahy2g2394 2 100115244 100126447 hybridization