Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2796 ATGGAACATTTGCTTGGAAGGTTGGAGAAAACTCTGTATGAGGTTGGACCTGTTCTTGATGATGCTGAGCAGAAGCAGTTCACTGACAAGAAAGTGAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATTTTGCTGATGATTTGGTCGATGAACTCTCCACTAAGGCCGCCATCGCCACCACTCTAAGAGATCCAGGTATCTCTTCTTCCTGTTCTTCTCTTGTTGATTCATATATTGAAGATACTGGTGACATGGAAAAAATAGTTGGTACACTAGAGTCTCTTGTAGCAAAGAAAAATTATCATCGTCTGAAAGAGTGCCCCAAGGTGGACATGTCATGGAGAACTCCATCCACATCTCTCGTTGTAAGTTCTGACATTTTTGGTCGGGACGAAGACAAGGAGAAGATAATTAAATTGCTGTTAGATGATACTCGTCATGCTGAATCACCTGTGACTGTCATTCCCATTGTGGGTATGGGCGGAATAGGAAAAACTACTCTGGCTCAACTGGTTTATAGTGATGTCAAAGTGGTGGAAAATTTTGACACTAGAGTATGGGTGTGTGTTGCTGAAAATCCCGACCCTGTTCATGTTACAAGGACAATAATAGGAGCAATAGATTCTTATTCCTGTAGCATGGACAATTTTGATTTTCTTCAGACTAATTTGAAGAAAAGGTTAACAGGAAAGAAATTCTTAGTTGTTTTGGATGATGTCTGGCATGATCACCGAGACACATGGGAGGATTTCCTGAAACCTTTTCGGGATGGGAATATTGGAAGTAAAATTCTCTTAACAACCTGGAGTGAAAAGGTTGCTTCTGTGTTCGTAGCTCCTAATCGACATTATCAATTAAGTTTATTGTCAGGCAAAGATTGTTGGTCGGTGTTTTCGAAGCATTCATCTGTTTCTACTAATTCCGAACAATATGCAACTCTAGAACCAATTGGCAGAAAAATTGTTGAAAAGTGTAAGGGATTACCTTTGGCTGTGAAGACACTTGGAGGCTTACTGCGCAATAAGTATAATGTAAGGGATTGGGAGAATATACTTAAAAGTGAAATTTGGGAACTCCCGGAAGATGAAAGCAAGATTATTCCTGCATTAAGAGTTAGCTATGACTACCTCCCTTCACATTTAAAGCGATGCTTTGTTTATTGCTCACTGTATCCTGAAGATTATCAATTTGCCAAATAG 1203 0.3982 MEHLLGRLEKTLYEVGPVLDDAEQKQFTDKKVKKWLVDLQDALYFADDLVDELSTKAAIATTLRDPGISSSCSSLVDSYIEDTGDMEKIVGTLESLVAKKNYHRLKECPKVDMSWRTPSTSLVVSSDIFGRDEDKEKIIKLLLDDTRHAESPVTVIPIVGMGGIGKTTLAQLVYSDVKVVENFDTRVWVCVAENPDPVHVTRTIIGAIDSYSCSMDNFDFLQTNLKKRLTGKKFLVVLDDVWHDHRDTWEDFLKPFRDGNIGSKILLTTWSEKVASVFVAPNRHYQLSLLSGKDCWSVFSKHSSVSTNSEQYATLEPIGRKIVEKCKGLPLAVKTLGGLLRNKYNVRDWENILKSEIWELPEDESKIIPALRVSYDYLPSHLKRCFVYCSLYPEDYQFAK* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2796 400 PANTHER OS01G0808000 PROTEIN 4 398 - -
Ahy12g2796 400 PRINTS Disease resistance protein signature 155 170 - -
Ahy12g2796 400 PRINTS Disease resistance protein signature 228 242 - -
Ahy12g2796 400 PRINTS Disease resistance protein signature 326 340 - -
Ahy12g2796 400 Pfam Rx N-terminal domain 2 58 IPR041118 -
Ahy12g2796 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 389 IPR027417 -
Ahy12g2796 400 Pfam NB-ARC domain 132 376 IPR002182 GO:0043531
Ahy12g2796 400 PANTHER DISEASE RESISTANCE PROTEIN RP 4 398 IPR044974 GO:0006952
Ahy12g2796 400 Gene3D - 114 280 IPR027417 -
Ahy12g2796 400 Gene3D - 290 379 IPR042197 -
Ahy12g2796 400 Gene3D - 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2796 Ahy-Chr12 117594084 117595660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2796 153 387 WRKY Transcription Factor Family AT5G45050 29.317 3.49e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2796 - - ahf:112729759 692.575