LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy12g2790	ATGGCTGCAAAACTTGATGGTGGAGCTTATCTCACTTCCTTTGTTGATGCCGTTTTAGACAAATTGTCTTCAATACTTGAAGATGACTCTGTCCTTCAAGGAAACTACTCTGCCCAGGAGTTGCTTGGAAGGTTGGAGAAAAGTCTGTATGATGTTGGACCTGTTCTTGATGATGCCGAGCAGAAGCAGTTCACCGACAAGAGAGTCAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATATGGCCGATGACTTGCTCGATGAACTCTCCACTGAAGCCGCTATCGCTGCCATTCAAACGGATCCAGGTAACTCTTCTTCCCGGTCTCGTGTGGTTGATTCATATATTGAAGACAGTGGTGATATGGAAAAAATAGTTGGTACACTAGAGTCTGTTGTAGCAAAGAAAAATTATCATCGTCTAAAAGAGTGCGCCAAGGTGGACATGTCGTCATGGAGAACTCCATCCACATCTCTCGTTGTAAGTTCTGACATATTTGGTCGGGACGAAGACAAGGAGAAGATAATCAAATTGCTGTTAGATGATACTTGTCATGCTAAATCACCTGTGACTGTGATCCCCATTGTGGGTATGGGCGGAATAGGAAAAACTACTCTGGCTCAACTGGTTTACAGTGATGTCCAAGTGGTTGAAAATTTTGACACTAGAGTGTGGGTGTGTGTTGCTGAAAATTCCGACCCTGTTCATGTTACAAGGACAATAATAGCGGCACTAGATTCCTGTCCTTGTAGCATGGACAATTTTGATTTTCTTCAATCTGATTTGAAAAAAAAGTTGACAGGAAAGACATTCTTAGTTGTTTTGGATGATGTCTGGCATGATCAACGAGACACATGGGAAGATTTTTTGAAACCTTTTTGGGATGGAAATCCTGTAAGTAAAATTCTCTTAACAACCCGTAGTGAAAAGGTTGCTTCTGTGTTCGCAGCTCCTAATCAACATTATGAACTAAGTTTATTGTCAGACGAATATTGTTGGTCAGTGTTTTTGAAACATTCATGTATTTCTACTAATTCCGAACAATATCCAACTCTAGAACCAATTGGTAGAAAAATTGTTGCAAAGTGTAAGGGATTACCTTTGGCTGTGAAGATACTTGGAGGTTTATTGCGCAATAAGTATAATGTAAGGGATTGGGAGAATATACTTGAAAGTGAAATTTGGGAACTCCCGGAAGATGAAAATAAGATTGTTCCTGCATTAAGAGTTAGCTATCACTACATCCCTTCACATTTAAAGCGATGCTTTGTTTATTGCTCATTGTATCCAAAAGATTATCAATTTCACAAAGATGAATTAATCTTGTTGTGGATGGCTGAAGATCTCTTACAGCCAATTGGAAACAATGCATTAGAAGATATTGGTTGTGCTTATTTTGATGAATTAGTTGCAAGATCATTTTTTCAACTTTCTAGTGCTTATGCTGGATTCTATGTAATGCATGATCTCATGCATGATCTAGCAACGTTTTTTGCTGGAAAATTCTTGTTCAGAGTCGACAAATTTGGCAATCCACACATGGCTGAGAGCAAAACTCGTTATTTGTCATATAATCGGGATCCAATCTCAAAATTTCTTGAGGCCTATAATGGAATATATATGAGAACATTTCTACCTGTTTATGTTCAATCAAATGATATTGGATGTGATTTTTGGCTAAAACAATTGAAGTGTTTAAGAGTTTTGTCATTTTGTGGCTTTAAAATCCTGTCATTGCCTGATTCAATAGGTGAGTTGATCCATTTGCGTTATTTGGATCTCTCCAAAATACCTATTGTCACGTTGCCTGAATCATTGTGTAGATTATACAATCTCCAAACATTGAAGTTGAGGGATTGTGAGAAGCTAGAGATGCTTCCCAGCCGCATGCAAGATCTTGTGAACCTACGCCATCTTGATATCAGGGGAGCTGATAGTTTAAAAGAGATGCCGAAAGGAGTGAGCAAGTTAAAGCATCTGAACTTCTTAATTCGTTATATTGTCGGGGAGCAAGTGGAGAATGGGATAAGAGAATTGGGAGCACTTGACAATCTTCATGGTTCACTTTGCATTTCCAACTTAGAGAATGTGAACAACAGCGGTGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCAACATTTTAGAATTGAAATGGCTTCCAGAAGATAATGGTGGTGATACTGTTGATGTTGAAAAAGAGAGAGAGATACTTGAGAAGTTACAACCTCACCGAAACTTGGAGGAGTTATCAATTTATAGTTACAGGGGTGAAACATTCCCCGATTGGTTAGGCCTTCCTTGCTACTCCAATATGACTACATTGATTCTGGCTTTCTTTAAGAATTGCCGTCAGGTTCCTTCACTGGGACAGTTACCCTCTCTGCAGCATCTGTTGATATGGGGACTTGATGGGTTGGAGAGAATTGGTGGTGAGTTTTACAACAACGCTGAATCATTTCATCAGGGGACACCCTTCAGATCTCTTCAAACTCTGGCATTTGGTGGAATGCCTCGCTGGCGAGAGTGGCATATTCCTGATGACTTTGATGGATTTCCTATACTTAAAAGCCTTTCAATAGAAGACTGTCCGGTGTTAAGTGGAGATCTGCCCGCTCACCTTCCGGCTCTGGAGGAATTGGATATACGGGAATGCCCAGAAATGGATTGTTTTGGAGAGGAGTGCCTCCCGCCGAGCTTGACAACTCTTCTGATCAGAAGATGCCAGAAACTGGAGAGTTGGATAACATCAAAGGGTTTGCAGAGTGAAGGCCTTACCCATCTTAGCCTTCGACAATGGAATGAAGTTAAGTCGTTCCCGAGAGAGGGTTGCCTTCCTGCTTCCCTCCGGTCTCTACAATTGTCGAAATTTTCAAATCTGGAGACGCTAGACTACAAGGGCCTTCTCCAACTCACCTCCCTCCAACAATTAACAATTGGATTCTGTCCAAAGCTGGAGAATATCACACAACAAAACCTGCCTGCCTCCATATTGAAACTCATCATCAAGGGAGAATGTCCATTGAGGAGTAAGCTGGAAGAGATGAACGACCCCCGGATTCAATTCCAAACAGGGTGGTTCAGGTTAGGAGTCAGACGCAGATTATGA	3117	0.4103	MAAKLDGGAYLTSFVDAVLDKLSSILEDDSVLQGNYSAQELLGRLEKSLYDVGPVLDDAEQKQFTDKRVKKWLVDLQDALYMADDLLDELSTEAAIAAIQTDPGNSSSRSRVVDSYIEDSGDMEKIVGTLESVVAKKNYHRLKECAKVDMSSWRTPSTSLVVSSDIFGRDEDKEKIIKLLLDDTCHAKSPVTVIPIVGMGGIGKTTLAQLVYSDVQVVENFDTRVWVCVAENSDPVHVTRTIIAALDSCPCSMDNFDFLQSDLKKKLTGKTFLVVLDDVWHDQRDTWEDFLKPFWDGNPVSKILLTTRSEKVASVFAAPNQHYELSLLSDEYCWSVFLKHSCISTNSEQYPTLEPIGRKIVAKCKGLPLAVKILGGLLRNKYNVRDWENILESEIWELPEDENKIVPALRVSYHYIPSHLKRCFVYCSLYPKDYQFHKDELILLWMAEDLLQPIGNNALEDIGCAYFDELVARSFFQLSSAYAGFYVMHDLMHDLATFFAGKFLFRVDKFGNPHMAESKTRYLSYNRDPISKFLEAYNGIYMRTFLPVYVQSNDIGCDFWLKQLKCLRVLSFCGFKILSLPDSIGELIHLRYLDLSKIPIVTLPESLCRLYNLQTLKLRDCEKLEMLPSRMQDLVNLRHLDIRGADSLKEMPKGVSKLKHLNFLIRYIVGEQVENGIRELGALDNLHGSLCISNLENVNNSGEALEAKMGNKKHINILELKWLPEDNGGDTVDVEKEREILEKLQPHRNLEELSIYSYRGETFPDWLGLPCYSNMTTLILAFFKNCRQVPSLGQLPSLQHLLIWGLDGLERIGGEFYNNAESFHQGTPFRSLQTLAFGGMPRWREWHIPDDFDGFPILKSLSIEDCPVLSGDLPAHLPALEELDIRECPEMDCFGEECLPPSLTTLLIRRCQKLESWITSKGLQSEGLTHLSLRQWNEVKSFPREGCLPASLRSLQLSKFSNLETLDYKGLLQLTSLQQLTIGFCPKLENITQQNLPASILKLIIKGECPLRSKLEEMNDPRIQFQTGWFRLGVRRRL*	1039

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy12g2790	1038	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	152	427	IPR027417	-
	Ahy12g2790	1038	PRINTS	Disease resistance protein signature	875	891	-	-
	Ahy12g2790	1038	PRINTS	Disease resistance protein signature	266	280	-	-
	Ahy12g2790	1038	PRINTS	Disease resistance protein signature	364	378	-	-
	Ahy12g2790	1038	PRINTS	Disease resistance protein signature	193	208	-	-
	Ahy12g2790	1038	Pfam	NB-ARC domain	170	413	IPR002182	GO:0043531
	Ahy12g2790	1038	Gene3D	-	327	411	IPR042197	-
	Ahy12g2790	1038	Gene3D	Ribonuclease Inhibitor	898	1006	IPR032675	-
	Ahy12g2790	1038	SUPERFAMILY	L domain-like	487	915	-	-
	Ahy12g2790	1038	Pfam	Rx N-terminal domain	14	97	IPR041118	-
	Ahy12g2790	1038	PANTHER	OS05G0414200 PROTEIN	33	989	-	-
	Ahy12g2790	1038	Gene3D	-	15	132	-	-
	Ahy12g2790	1038	Gene3D	-	150	321	IPR027417	-
	Ahy12g2790	1038	Gene3D	Ribonuclease Inhibitor	550	897	IPR032675	-
	Ahy12g2790	1038	Gene3D	-	412	497	IPR036388	-
	Ahy12g2790	1038	PANTHER	DISEASE RESISTANCE PROTEIN RP	33	989	IPR044974	GO:0006952
	Ahy12g2790	1038	SUPERFAMILY	L domain-like	875	1007	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy12g2790	Ahy-Chr12	117543453	117547394	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy12g2790	178	496	WRKY Transcription Factor Family	AT5G45050	25.664	4.22e-08	55.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy12g2790	-		-	ahf:112729759	1283.86