Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2788 ATGGCTGCAAAACTTGAAGGTGGTGGAGCTTATCTCTCTTCCTTTGTAGATGTTGTTTTAAAGAAGCTGTATTTAGTACTTGATGACGACGACTCATTCACCGAAAGGAACAACTTGCTTGGAAGATTGGAGAAAAGTCTGTCTGATGTTGGACCTGTTCTTGATGATGCTGAGCAGAAGCAGTTCACTAACGAGAAAGTGAAGAGTTGGCTTGATGATCTCCAAGATGCTCTCTATAAGGCTGATGACTTGGTCGATGAACTCTCCACTGAAGCTGCCATTGCCACCCAAAGGGATCCAGGTAACTCTTATTCCTGGTCTCATCCGGTTGATTCATATATTAATTATAGTAGTGGCAAGGAAAAAGTAGTTCAAAGACTAGAGTATGTTGTAGCACGCAAAAATTTACTTCATCTGAAGGAGAGTGCCAAGGTGGACATGTCATCATGGAGAACTCCATCCACATCTCTCGTTGTAAGTTCCGACATATTTGGTCGGGACAATGACAAGGAAAAGATAATCAAATTGTTGCTAAATGATACTTGTCATGCTGAATCACCTGTCACTGTGATCCCTATTGTGGGTCTGGGTGGAATAGGAAAAACTACTTTGGCTCAATTGGTTTACAATGATGCCAAAGTGGCGAAAAATTTTGACCTTAAAGTGTGGGTGTGTGTTGCTGAAAACTTTGATCCTGTTAACCTTACACGGATTATACTAAAGAAAATAACTTCTTGTTCTTGTGACACCGATGACTTTGAATCACTTCAGACTGATTTGAAGGATAAGTTGGCAGGGAAGAGATTCTTAGTTGTTTTAGATGACGTCTGGGATGATCGAGAGGATATATGGGAGGATATTCTAAAACCTTTTTGGTACGAGAATAATGGAAGTAAAATTCTCTTAACAACCCGTAGTGAAAAGGTTGCTTCTGTTTTCACAGCTACTAATCAACATTACCAACTGCGTTTATTGTCTGATCAAGACTGTTGGTCGGTGTTTTTTAGGCATTCATCTCTTTCTATTAATTCTAAACAATATGCAACTCTAGAACCAATTGGTAGAAAAATTGTTGAAAAGTGTAAGGGGTTACCTTTGGCTGTGAAGACACTCGGAGGTTTATTGCGCCACAAGTATAATGTAGGGGACTGGGAGAATATACTTGAAAGTGAAATTTGGGAACTCCCAGAAGATAAGAGTAAGATTGTTCCTGCATTAAGAGTAAGCTATCACTATCTTCCTTCACATCTAAAGCGGTGCTTTATTTACTGCTCATTATTTCCTGAGGATTATCAATTTGACAAAAATGAATTAATCTTGCTGTGGATGGCTGAAGATCTCGTACTACCAAACGAAAACTACACGTTAGAAAATATTGGTTGTACATATTTTGATGAGTTAGTTGCAAGGTCATTTTTTCAACCTAGTATTGATGTTGGTTTATTTGTAATGCATGATCTCATGCATGATTTAGCAACATTTTTTGCTGGAAAGTTTTATTTCAGAGTCAGAGAATTTGGAGATCTACAAAAGATTCACGACAAAACTCGTCATTTGTCATATACGGCAAATCCTAACGATCCAGTCATACGACTTGGAGAGCCCTACAAGGGAGAAACTCATATGAGAACATTTCTAGTTGTTCATTTGCTTCATCTTTATGAATTAATTGATATAACAAGTGATTCTTTGCACTTACAATTATTAGAATTGAGGTGTTTAAGAGCGTTGTCATTTAAATGTTTTTGTATTGAGTCATTGCCTGATTCAATAGATAAACTGATCCATTTGCATTATTTGGATCTCTCTTACACCCTTATTTTGACATTGCCCGAGTCATTGTGTAAATTATACAATCTCCAAACGTTGAAGTTGACTTATTGTGAGAGGCTGAAGATTCTTCCTTGCCGTATGCAAGATCTAGTGAACCTGCGCCATCTTGATATTGAAGGAACTTCTTCGTTGATAGAGATGCCAAAGGGAATGAGCAAGTTAAAACATCTGAACTTCTTGAGTGGTTATATTCTCGGCAAGCAGGAGGAGAATGGAATAAGAGAATTGGGATCACTTGACAATCTTCATGGCTCACTATGTATTTCCAACTTAAAGAATGTCAACAACAGCCGTGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCAACATTTTAGAATTGAAATGGATTCCAGAGGACGATGACGAGGAAGATGATGATGTTGATTTTCAAAAAGAGAGAAACATACTTGGGGAGTTACAACCTCACCGAAACTTGAAAGAGTTATCAATTGATGATTATAGGGGTGAAATATTCCCTGATTGGTTAGGCCTTTCTTGCTACTCCAATTTAACCAACTTGAGTATGTATCGTTGTAAGAATTGCCGTCAGCTTCCTTCACTAGGACAGTTACCCTCTCTGGAGCATCTCAGAATTTTTGATTTCGATGGGTTGGAGAGAATTGGTGGTGAGTTTTACAACAACGCTGAATCATCTCATCAGGGCACACCCTTCAGATCTCTTCAAACTCTGATATTTTGTGGAATGCCTCGCTGGCGAGAGTGGCATACTCCTGATGACTTTGACGGATTTCCGAAACTTAAAAAACTTGACATAGCAGAATGTCCGGTGTTAAGTGGAGATCTGCCAGCTCACCTTCCGGAAATGGAGCAACTTACCATTTGGAAGTGCGAAGAGCTTGCATGTTCGCTGCCGAGAGCTCCCAAGCTTCAAGAATTACTTGTAAGTAGTTCTGAGTGCTTGGAGGATGTGAAACCGCACGAGGTAGTAATTGAAGAAACTCAGCAGGCGAAGTCCGTATTGGAGTGCCTGCTCCACATCGAATCGCTGTGTCTCCAAAGTTTGAAAATCCAGAAGTGTTCATCAGCCATATCAATTTCAGGAGACTATTTGCCGGATTCATTACAAGATCTGAGGATATCAGATTGTTCAAAATTAACATTCTCTAAGCCATTGCAACACAAGTCCCTAACGGAGATACATGTGTCCCAGTGTGATTCACTGACGTTGTTTCCATTGGGGTCCCTTCCAAATCTCAAGAAACTCTCAATCTCAGAATGCCCCCGTTTAGCATCCGTGCCGGGGCTAGGCTTTTCTGCGCCACACCTAGAGATACTGGAAATTGATGCTTGCGAAGAAATAGATTCTTTTGGAGAGGAGTGCCTCCCACCGAGCTTGACAACTCTTCGGATCAGTAAATGCGAGAAACTAGAGAGGTGGATAACATCCAATGGTTTGCAGGGTGAAGAATCTCCTTTGAGGTGCAAAGTGGAAGGGATGAAGGATCAACAAATTCAATCATAA 3324 0.4007 MAAKLEGGGAYLSSFVDVVLKKLYLVLDDDDSFTERNNLLGRLEKSLSDVGPVLDDAEQKQFTNEKVKSWLDDLQDALYKADDLVDELSTEAAIATQRDPGNSYSWSHPVDSYINYSSGKEKVVQRLEYVVARKNLLHLKESAKVDMSSWRTPSTSLVVSSDIFGRDNDKEKIIKLLLNDTCHAESPVTVIPIVGLGGIGKTTLAQLVYNDAKVAKNFDLKVWVCVAENFDPVNLTRIILKKITSCSCDTDDFESLQTDLKDKLAGKRFLVVLDDVWDDREDIWEDILKPFWYENNGSKILLTTRSEKVASVFTATNQHYQLRLLSDQDCWSVFFRHSSLSINSKQYATLEPIGRKIVEKCKGLPLAVKTLGGLLRHKYNVGDWENILESEIWELPEDKSKIVPALRVSYHYLPSHLKRCFIYCSLFPEDYQFDKNELILLWMAEDLVLPNENYTLENIGCTYFDELVARSFFQPSIDVGLFVMHDLMHDLATFFAGKFYFRVREFGDLQKIHDKTRHLSYTANPNDPVIRLGEPYKGETHMRTFLVVHLLHLYELIDITSDSLHLQLLELRCLRALSFKCFCIESLPDSIDKLIHLHYLDLSYTLILTLPESLCKLYNLQTLKLTYCERLKILPCRMQDLVNLRHLDIEGTSSLIEMPKGMSKLKHLNFLSGYILGKQEENGIRELGSLDNLHGSLCISNLKNVNNSREALEAKMGNKKHINILELKWIPEDDDEEDDDVDFQKERNILGELQPHRNLKELSIDDYRGEIFPDWLGLSCYSNLTNLSMYRCKNCRQLPSLGQLPSLEHLRIFDFDGLERIGGEFYNNAESSHQGTPFRSLQTLIFCGMPRWREWHTPDDFDGFPKLKKLDIAECPVLSGDLPAHLPEMEQLTIWKCEELACSLPRAPKLQELLVSSSECLEDVKPHEVVIEETQQAKSVLECLLHIESLCLQSLKIQKCSSAISISGDYLPDSLQDLRISDCSKLTFSKPLQHKSLTEIHVSQCDSLTLFPLGSLPNLKKLSISECPRLASVPGLGFSAPHLEILEIDACEEIDSFGEECLPPSLTTLRISKCEKLERWITSNGLQGEESPLRCKVEGMKDQQIQS* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2788 1107 PANTHER DISEASE RESISTANCE PROTEIN RP 36 987 IPR044974 GO:0006952
Ahy12g2788 1107 SUPERFAMILY RNI-like 838 1078 - -
Ahy12g2788 1107 Gene3D Ribonuclease Inhibitor 540 935 IPR032675 -
Ahy12g2788 1107 Gene3D - 147 319 IPR027417 -
Ahy12g2788 1107 Gene3D - 409 493 IPR036388 -
Ahy12g2788 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 424 IPR027417 -
Ahy12g2788 1107 SUPERFAMILY L domain-like 483 901 - -
Ahy12g2788 1107 Gene3D Ribonuclease Inhibitor 936 1088 IPR032675 -
Ahy12g2788 1107 Coils Coil 71 91 - -
Ahy12g2788 1107 Pfam Rx N-terminal domain 15 94 IPR041118 -
Ahy12g2788 1107 PANTHER OS05G0414200 PROTEIN 36 987 - -
Ahy12g2788 1107 PRINTS Disease resistance protein signature 639 655 - -
Ahy12g2788 1107 PRINTS Disease resistance protein signature 190 205 - -
Ahy12g2788 1107 PRINTS Disease resistance protein signature 263 277 - -
Ahy12g2788 1107 PRINTS Disease resistance protein signature 361 375 - -
Ahy12g2788 1107 Pfam NB-ARC domain 167 409 IPR002182 GO:0043531
Ahy12g2788 1107 Gene3D - 16 122 - -
Ahy12g2788 1107 Gene3D - 324 408 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2788 Ahy-Chr12 117501576 117505967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2788 188 844 WRKY Transcription Factor Family AT5G45050 22.760 2.60e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2788 - - ahf:112709990 1360.51