Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2733 ATGGGAAGAACACCTTGCTGTGAGAAGAATGGGCTGAAGAAGGGGCCATGGACGCCAGAGGAGGATCAGAAGCTCGTTGATTACATTCACAAACATGGCTACGGCAATTGGAGAACGCTCCCTAAGAATGCCGGGTTGCAAAGATGCGGAAAGAGTTGCCGTCTGCGGTGGACAAACTATCTCCGGCCAGATATAAAGCGCGGTCGATTCTCCTTGGAAGAGGAGGAGACCATAATACACCTTCACAGCATTCTTGGAAACAAGTGGTCTGCAATAGCGTCGCGGCTGCCAGGGAGGACAGACAACGAAATAAAGAATTATTGGAATACACACATTAGGAAGAGGCTACTGAGGATGGGAATCGATCCTGTGACACACAGTCCACGCCTAGACCTTCTTGATCTCTCATCTCTCTTTGGTTCATCAATATCACACATCAACAATAACATGCAACACCATCTTAACCCTGAGCTTCTCAAATTGGCCACGTCACTCTTCTCTCATACTAATTCTCTTGACAACAGCCACAACCAAATCATCAGTAGTGATGTTTCCTTGTCTTTCCCTCAAGCAAACTTTCTAGAATCCAATAATAATGTGGACTCAGCATACCCATCAAATCTAATGAATACTAGTGATTATTGGCACGCCGATAATAATAATATTGGAATTGCTTCAACTTCTAGCCCTTGTTATGTGACTGACCAATTACCAACAAGTTATTATTATAACAATAATAGTAACAACTACTACTGTCATCATGCAAGTCTTGTGGACCCACCTATGTCTGAAACGTCAACCTTCCATTCCAATAATAGCAGCAGTAATACTTATGTCAATGGAAACAACAGTAGCACCGAGGATGAGAGAGAAAGCTATGTCAGCACCAATAACAGCGTCTTGAGATTTGAAATCCCAGATATGTTGGATGTCAATGCATTCGTGTAA 948 0.4304 MGRTPCCEKNGLKKGPWTPEEDQKLVDYIHKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSLEEEETIIHLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSLFGSSISHINNNMQHHLNPELLKLATSLFSHTNSLDNSHNQIISSDVSLSFPQANFLESNNNVDSAYPSNLMNTSDYWHADNNNIGIASTSSPCYVTDQLPTSYYYNNNSNNYYCHHASLVDPPMSETSTFHSNNSSSNTYVNGNNSSTEDERESYVSTNNSVLRFEIPDMLDVNAFV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2733 315 CDD SANT 69 112 IPR001005 -
Ahy12g2733 315 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy12g2733 315 CDD SANT 16 61 IPR001005 -
Ahy12g2733 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Ahy12g2733 315 PANTHER TRANSCRIPTION FACTOR MYB41 1 310 - -
Ahy12g2733 315 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy12g2733 315 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy12g2733 315 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy12g2733 315 SMART sant 13 63 IPR001005 -
Ahy12g2733 315 SMART sant 66 114 IPR001005 -
Ahy12g2733 315 Gene3D - 69 116 - -
Ahy12g2733 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Ahy12g2733 315 MobiDBLite consensus disorder prediction 264 290 - -
Ahy12g2733 315 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy12g2733 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 310 - -
Ahy12g2733 315 Gene3D - 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2733 Ahy-Chr12 117005649 117007035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2733 1 315 MYB Transcription Factor Family AT4G21440 52.809 5.94e-110 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy12g2733 Myb_DNA-binding 8.10E-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2733 K09422 - zju:107421995 334.339