Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2728 ATGGGTAACGAAGAAGACTTCGCCGGAGAACCCAACTCCTTTAGGAAGGAGGCACCCGCCGGAACTTCCAACCTCCTCCGGCGAGCAGCGGAGCTCATTGCCACCGTGCTCTCCCTCTCCCTCTCGATCAGGGCCTTCGCCACCAAATGGCAACTCATCCGGACCAAGCTCGAGGAGCTCCACTCCGGCCTAATCGCCGCCGAGAACTGCGACTCCGGCGAGAACCCACAGCTCACGGGCATCCTCCCATCGGTGATTTCGACCGCCGGAGAGTGCCGCGACTTGGCGCGCCGTTGCTCCGACCTCTCCTACAGCGGGAAGCTCCTTATGCAGAGCGATTTGGACGTGGCGATTGCAAAGCTCGACGGCCACGTCAGCACCCTCTCGGAGATTTACAAAAAAGGAATATTGGCGAATGGGTCTGCCCTCGTCGTTTCAAAACCGAGTCTTGGCGCTTCAAGAGAAGACATAAGGTTCTACGTGAGGGACCTATTAACGAGGATGAAGATTGGGGATTTGGGTATGAAGAAAGTGGCTCTCAGGAACCTGTACGAGGTTGTCGTCGAGGATGACAGGTACGTTAAGGCCGTTGTGGACGTTGGTGACGTGGTTCATGTGCTGGTTGGGTTTCTTGGTTCAACTGAATCGGGACTCCAAGAGGAGAGTGCAAAGGTTGTTTCTGTGATTACAGGATTTGGTTGCTACAAGGGCAATTTGGTAAATTCAGGAGTGGTTGCGCCGTTGGTTAGGGTGCTGGATTGTGGGAGCGAAGAAGGGAAAGTTGCTGCAGCGAGGTGTTTGGTGAAGCTCACTGAGAATTCTGATAACGCTTGGTGTGTTTCTGCACATGGTGGTGTCACTGCGTTGCTTAGAATTTGTGATGGTGATGATGGTGGTTGTGACGGAGATTTGATTGGTCATGCGTGCGGTGTGTTAAGCAATCTTGTTAGTGTTGAAGAGATTAAGAGGTTTATGATTGAGGAAGGTGCGGTTTCTACGTTTATAAGGCTTGTGAGGTCCAGGGATGAAGCCATTCAAGTGAATTCAATAGGCTTCATTCAGAACATTGCCTCTGGTGATGAATTGGTTAAGCAGATGGTGATTAGAGAAGGTGGAATCCGTGCTCTGTTGCGTGTTCTTGATCCTAAATGGCCCTGTTCTTACAAAACAAGGGAGATTTCAATAAGGGCTATTGAGAATTTGTTTTTCTCTCCGCTTAGCTCTGTGAGTGCTTTGATTAGTTACGGTTTTGTGGATAGTTTGCTGTATTATGTTCGAAATGGCGAGGTTTCGATTCAAGAATTGGCGCTGAAAGTGGCATTTCGATTGTCTGGAACGTCCGAGGAGGCGAAGAAATCAATGGGGGATGCAGGTTTCATGGCTGAGCTTGTGAAATTCCTGAATGCGAAATCGTTTGAGGTTCGCGAAATGGCAGCTGAGGCACTCTCTGGGTTGGTTATGTTGCCTAAGAACAGAAAGAGGTTTGTGCAGGATGACCATAACATTGCACTTATCCTTCAATTGCTTGATCCTGAAGAGGGGAATTCAGGTAACAAAAAGCACTTAATCTCAATCTTAATGTCATTGACAAGTTGCAATAGTGGGAGGAAAAAGATTGTTAGTTCTGGTTATGCAAAGAACATTGAGAAGCTTGCAGATGCTCAAGTTTCTTCTGATGCCAAGAAACTTGCAAAGAAGCTATCCACAAACAGGTTCCGCAGCTTGTTCAGTGGAATCTGGCATTCATGA 1749 0.486 MGNEEDFAGEPNSFRKEAPAGTSNLLRRAAELIATVLSLSLSIRAFATKWQLIRTKLEELHSGLIAAENCDSGENPQLTGILPSVISTAGECRDLARRCSDLSYSGKLLMQSDLDVAIAKLDGHVSTLSEIYKKGILANGSALVVSKPSLGASREDIRFYVRDLLTRMKIGDLGMKKVALRNLYEVVVEDDRYVKAVVDVGDVVHVLVGFLGSTESGLQEESAKVVSVITGFGCYKGNLVNSGVVAPLVRVLDCGSEEGKVAAARCLVKLTENSDNAWCVSAHGGVTALLRICDGDDGGCDGDLIGHACGVLSNLVSVEEIKRFMIEEGAVSTFIRLVRSRDEAIQVNSIGFIQNIASGDELVKQMVIREGGIRALLRVLDPKWPCSYKTREISIRAIENLFFSPLSSVSALISYGFVDSLLYYVRNGEVSIQELALKVAFRLSGTSEEAKKSMGDAGFMAELVKFLNAKSFEVREMAAEALSGLVMLPKNRKRFVQDDHNIALILQLLDPEEGNSGNKKHLISILMSLTSCNSGRKKIVSSGYAKNIEKLADAQVSSDAKKLAKKLSTNRFRSLFSGIWHS* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2728 582 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 329 372 IPR000225 GO:0005515
Ahy12g2728 582 Gene3D - 160 571 IPR011989 -
Ahy12g2728 582 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 582 - -
Ahy12g2728 582 SUPERFAMILY ARM repeat 162 566 IPR016024 -
Ahy12g2728 582 Pfam Armadillo/beta-catenin-like repeat 320 358 IPR000225 GO:0005515
Ahy12g2728 582 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 284 330 IPR000225 GO:0005515
Ahy12g2728 582 SMART arm_5 447 487 IPR000225 GO:0005515
Ahy12g2728 582 SMART arm_5 190 231 IPR000225 GO:0005515
Ahy12g2728 582 SMART arm_5 360 403 IPR000225 GO:0005515
Ahy12g2728 582 SMART arm_5 318 358 IPR000225 GO:0005515
Ahy12g2728 582 SMART arm_5 273 317 IPR000225 GO:0005515
Ahy12g2728 582 SMART arm_5 232 272 IPR000225 GO:0005515
Ahy12g2728 582 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2728 Ahy-Chr12 116939900 116942285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2728 144 381 U-box Gene Family AT2G23140 25.794 6.42e-08 53.5