Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2685 ATGTATGTTGCTGATGACTTGTTGGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCTTCTCTCGTTATCTCAGTTTGCAAGATAGGGAGATAGCAAACAGGGTGGAGGAAATCACTGATAGGATAGAGTCTATTGTGAAGCAAAAAGACACTCTTGGTCTCAGAGAAATTCCTAAGGAGAACATGTCATGGAGGATTAAAACATCTCTAGTTGATAGATCTAATGTATATGGCAGGGAAGATGACAAGGCGGCCATAGTGAACTTGTTGTTGGATGATGATGATGACACTGGTGATGCTGATATATCTGTGATTTCCATTGTGGGCATAGGTGGAATAGGAAAGACTACTTTAGCCCAATTGGTTTACCACCATGATAAAGTGAAGGAGAATTTTGATTTTAGAGGTTGGGTTTGTGTGTCAGAAGGGTTTGATGTCATGAAGGTCACCAAGAATATACTTGATGCAATAACAAGGAGTCCTTGTAACTTGAAAATTTTGAATTTACTCCTACAAGATTTACAGGAAAAGTTGTCAGGGCAAAGATTCTTTATCGTCTTGGATGATGTATGGAACGAGGATTATTACGATTTGAATAGGCTTCTAAAACCTTTTCAACATGAGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAAAGGTGGCTTCTGTGGTGCAAACTGTTTCACCTCATGAACTAAATTTATTGTCTGATGAAGATTGTTGGTTAGTGTTTTCAAAACATGCATTTCTTTTCACCGACTCTGTTCAGACTCCAACTTTGGAAAAGGTCGGTAGAAAGATTGTAAAGAAGTGTAACGGATTATCTTTGGCAGCTCAATCTCTTGGAGGTTTATTGCGTGGAAATTCTAATGTCAAAGATTGGAATCATATATTGAAGAGTGAGATATGGAAATTCTTTAATGATAGGATAAATATTGTACCTGCATTAAGAATTAGTTATTACTATCTTTCTCCATGTTTGAAAGAGTGTTTTGTTTATTGTTCGTTCACTTCTTTGTATTCCAAGGACCATGAATTTGACAAAGACTTGTTTGTTGGGAAGCGTGAAGAGAACAAGATTACAGAATTGGGAGCACTTGCAAATCTACACAAATCAAGGATGTTCGATAAGAATGGCATTAACTCTTTAAAGTTGAAGTGGTCATCAGATAAAGATGAAAATATAGCTTATTCCCAAATTGAAAGAGATATACTAGACAAGTTTCAACCTCAGTAA 1260 0.3667 MYVADDLLDEVFTKAATQKDPGTFFSRYLSLQDREIANRVEEITDRIESIVKQKDTLGLREIPKENMSWRIKTSLVDRSNVYGREDDKAAIVNLLLDDDDDTGDADISVISIVGIGGIGKTTLAQLVYHHDKVKENFDFRGWVCVSEGFDVMKVTKNILDAITRSPCNLKILNLLLQDLQEKLSGQRFFIVLDDVWNEDYYDLNRLLKPFQHEVKGSKILITTRSKKVASVVQTVSPHELNLLSDEDCWLVFSKHAFLFTDSVQTPTLEKVGRKIVKKCNGLSLAAQSLGGLLRGNSNVKDWNHILKSEIWKFFNDRINIVPALRISYYYLSPCLKECFVYCSFTSLYSKDHEFDKDLFVGKREENKITELGALANLHKSRMFDKNGINSLKLKWSSDKDENIAYSQIERDILDKFQPQ* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2685 419 Pfam NB-ARC domain 89 307 IPR002182 GO:0043531
Ahy12g2685 419 PRINTS Disease resistance protein signature 109 124 - -
Ahy12g2685 419 PRINTS Disease resistance protein signature 279 293 - -
Ahy12g2685 419 PRINTS Disease resistance protein signature 182 196 - -
Ahy12g2685 419 Gene3D - 64 236 IPR027417 -
Ahy12g2685 419 Gene3D - 242 331 IPR042197 -
Ahy12g2685 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 342 IPR027417 -
Ahy12g2685 419 PANTHER OS05G0414200 PROTEIN 3 358 - -
Ahy12g2685 419 PANTHER DISEASE RESISTANCE PROTEIN RP 3 358 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2685 Ahy-Chr12 116410862 116412335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2685 106 295 WRKY Transcription Factor Family AT5G45050 27.179 1.55e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2685 - - ahf:112730663 797.349