Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2673 ATGAATTTCGTGAAGTCAAAAAGAAAAATCAAAATGCGATTTCCACTCTCACACTCACTCCGTTTAGCTTCTTCCCTCCGCACCAAGTCAAACAAGTTTCAATTCCACCACTTCACCACCACCACCACCGCCACGCCGGAACTACGACCCGACCCGCCACCTATTCGAGTCGGCCTCACAGACTCGGCGGGGCGCGGTGTCTTCGCCACCCGTCCGATCGGCACCGGAGAACTCATTCACACCGCCAAGCCCGCCGTATGCCACCCTTCTCCCAACGTTCTCCACACTGTCTGTTACTGCTGCCTCCGCAGAATCTCTAATCCCGATGGCTCCGAAGCTCAACGCGTGTCGTTTTGCAGTGAAGATTGTAAACGACGCTGCATGGAATTTTACAATGTTGAGATGAAAGCAGATTGGGCGGCTTTTGATGACTATTGCGGGACCCATGGTTTGAAATATCCTTTCATGGTGAAGCGGTTGGCTTGCATGGTCATATCAGGAGTTGCCAGAAGTGACAGTGTTGACATACTTCAACCTGCCAATTTGACACCTCAGATGATTTCACGGATGGAAGAAGAGTTTGGCTTGTTATGGAATGCTTTCAGAAAGACACTTATTTCAGATGAAGATATTTCTTTTTTAACCAAGCAATGGTACATTGGTGTTTTGGCACGAATTCGAATCAATGCATTTCGCATTGAGTTGGCTGCTGGGCTATATGAAGATCTTCTTTCGTCAGCAGCGGCATCTGTAGAAGCTGAAGCTGCCGTTGGACATGCTGTCTACATACTTCCGTCCTTCTACAATCATGATTGTGATCCAAATGCGCACATTATATGGATAGATAACGCAGATGCAAAATTGAAGGCCCTTCGTGATGTTGACGAAGGTGAAGAACTTAGAATCTGCTACATTGATGCCAGCCTGGACCGCGATGCTCGGCAAGAACTTTTATCTCGGGGATTTGGTTTTCAATGCAACTGTACCAGGTGCATACATGGAGATTAA 1008 0.4752 MNFVKSKRKIKMRFPLSHSLRLASSLRTKSNKFQFHHFTTTTTATPELRPDPPPIRVGLTDSAGRGVFATRPIGTGELIHTAKPAVCHPSPNVLHTVCYCCLRRISNPDGSEAQRVSFCSEDCKRRCMEFYNVEMKADWAAFDDYCGTHGLKYPFMVKRLACMVISGVARSDSVDILQPANLTPQMISRMEEEFGLLWNAFRKTLISDEDISFLTKQWYIGVLARIRINAFRIELAAGLYEDLLSSAAASVEAEAAVGHAVYILPSFYNHDCDPNAHIIWIDNADAKLKALRDVDEGEELRICYIDASLDRDARQELLSRGFGFQCNCTRCIHGD* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2673 335 ProSiteProfiles SET domain profile. 53 305 IPR001214 GO:0005515
Ahy12g2673 335 Gene3D SET domain 66 331 IPR046341 -
Ahy12g2673 335 Pfam SET domain 64 304 IPR001214 GO:0005515
Ahy12g2673 335 Gene3D - 97 148 - -
Ahy12g2673 335 CDD SET_SMYD 258 331 - -
Ahy12g2673 335 SUPERFAMILY SET domain 50 331 IPR046341 -
Ahy12g2673 335 SMART set_7 53 311 IPR001214 GO:0005515
Ahy12g2673 335 Gene3D - 149 230 - -
Ahy12g2673 335 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 60 332 - -
Ahy12g2673 335 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 60 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2673 Ahy-Chr12 116343458 116347183 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy12g2673 SET 1.50E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2673 - - adu:107475991 649.818