Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2663 ATGAACAACCTCAAAAAATCACCATGTTTTCCCTTTATACCAATCCTATCCATGATTTTTGCACTGATCTTTTTAGCTACACATCTCAATTATTTCATTGAAGCCCCAAATTTCAAATCAACAACACCACAAGAAGGGAAAAAACATCTCCATTTCCAAAACCATATCCAATTAGTAGCACATTCAAAATGCAAAGGAACACTCTACCCTGATCTCTGTGTCTCAACCTTATCCACATTCCCAAACCTTGAAACAAAAACAATGCCACAAATAATCTCCAAAGTAGTCAACCACACAGTCCATGAAGTCAAATCTTCATCCAACAACTGCACCACCATAATCAAGAATCTCCAAAACACTCTCAACACCATTGAGAAAAGAGCCTTAGATGATTGTCTCAAACTCTTTGATGACACCATAGTAGAACTCAACACCACCATTCTTGATCTCTCAAAAAATCCATCATCATCATCATCATCTTCCAACCAAGATTTGCAAACTCTACTAAGTGGGGCAATGACAAATTTGTACACTTGTCTTGATGGTTTCTCACAAAGCAATAATGGGAATGCTGTGAGAGGGTTGATAGAGGAGAAAGTGATTGAGATATCACATCATGTTAGTAACTCATTGGCAATGTTGAAGAAAGTGAAGACAAGTTTGAAGAAAGAAGAGGTGTTTGCTGAATATGGAACAATGAAGAAAGGGTTCCCTTCATGGGTTTCTGCTAAGGATAGGAAGCTTCTAGAAGGTGGAAATGTGAATGAAACTAAGATTGATGTTGTTGTGGCTAAAGATGGTTCTGGAAATTTTACTACTATTGGTGAAGCTGTAGTTATGGCTCCTAATTCCAGCACAACCAGGTTTGTGATATACATAAAAAGTGGAGCATACTTCGAGAATGTGGAAGTAATTAGAAAGAAGACTAATTTGGTGTTTATTGGAGATGGCATCGGAAGGACCATTGTCAAGGCAAGTAGGAATGTTGTCGATGGCTGGACCACTTTTCAATCAGCTACTGTTGCTGTGGTAGGAGAAGGCTTCATAGCTAAGGGCATAACCTTTGAGAACTCAGCCGGGCCAGACAAGCACCAAGCCGTGGCTCTACGAAGCGGCGCCGACTTCTCCGCCTTCTACAAATGCAGCTTCGTCGGCTACCAAGACACCCTCTACGTCCACTCCATGCGCCAATTCTACCGCGACTGCGACATTTACGGCACCGTTGACTTCATATTCGGTAACGCCGCCGTACTCTTCCAAAATTGCAACCTCTACGCTCGCAAACCTAACGAGAATCAGAAGAATCTGTTCACCGCACAAGGCAGAGAAGATCCGAACCAGAACACCGGAATTTCGATCTTGAATTGCAAGATCGCCGCCGCATCTGACCTAATTCCGGTCAAATCGTCGTTCAGGAGTTACTTAGGGAGGCCATGGAAACTATACTCGAGAACGGTGTACCTTAGATCTTACATGGAGGATCTGATTGATCCGAAAGGGTGGCTTGAATGGAATCAGACATTTGCATTGGACACGCTTTATTATGGTGAGTATATGAATAAGGGGCCAGGTTCAAACACAAGTGGTAGAGTTAATTGGCCAGGTTTTAGAGTTATTAATAGTTCCAATGAAGCAAGCCAATTCAGTGTTGGTGAGTTCATACAGGGTAGTGAGTGGTTGAACAACACTGGCATTCCATTCTTCTATAATTTGAGTTGA 1719 0.4194 MNNLKKSPCFPFIPILSMIFALIFLATHLNYFIEAPNFKSTTPQEGKKHLHFQNHIQLVAHSKCKGTLYPDLCVSTLSTFPNLETKTMPQIISKVVNHTVHEVKSSSNNCTTIIKNLQNTLNTIEKRALDDCLKLFDDTIVELNTTILDLSKNPSSSSSSSNQDLQTLLSGAMTNLYTCLDGFSQSNNGNAVRGLIEEKVIEISHHVSNSLAMLKKVKTSLKKEEVFAEYGTMKKGFPSWVSAKDRKLLEGGNVNETKIDVVVAKDGSGNFTTIGEAVVMAPNSSTTRFVIYIKSGAYFENVEVIRKKTNLVFIGDGIGRTIVKASRNVVDGWTTFQSATVAVVGEGFIAKGITFENSAGPDKHQAVALRSGADFSAFYKCSFVGYQDTLYVHSMRQFYRDCDIYGTVDFIFGNAAVLFQNCNLYARKPNENQKNLFTAQGREDPNQNTGISILNCKIAAASDLIPVKSSFRSYLGRPWKLYSRTVYLRSYMEDLIDPKGWLEWNQTFALDTLYYGEYMNKGPGSNTSGRVNWPGFRVINSSNEASQFSVGEFIQGSEWLNNTGIPFFYNLS* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2663 572 Pfam Pectinesterase 260 556 IPR000070 GO:0030599|GO:0042545
Ahy12g2663 572 Pfam Plant invertase/pectin methylesterase inhibitor 62 213 IPR006501 GO:0004857
Ahy12g2663 572 CDD PMEI-like_3 64 216 - -
Ahy12g2663 572 SMART PMEI_2 55 213 IPR006501 GO:0004857
Ahy12g2663 572 ProSitePatterns Pectinesterase signature 2. 404 413 IPR033131 -
Ahy12g2663 572 PANTHER PECTINESTERASE 42 571 - -
Ahy12g2663 572 SUPERFAMILY Pectin lyase-like 258 569 IPR011050 -
Ahy12g2663 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 59 218 IPR035513 -
Ahy12g2663 572 TIGRFAM PME_inhib: pectinesterase inhibitor domain 59 216 IPR006501 GO:0004857
Ahy12g2663 572 PANTHER PECTINESTERASE 42 571 - -
Ahy12g2663 572 Gene3D - 254 571 IPR012334 -
Ahy12g2663 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 216 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2663 Ahy-Chr12 116262503 116271026 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2663 90 571 Carbohydrate Esterase AT4G02320 55.152 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2663 K01051 - gmx:100802881 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2663 12 116262503 116271026 Ahy12g2663 12 116262503 116271026 ECH
Ahy12g2663 12 116262503 116271026 Ahy6g0663 6 8189055 8193779 PCT