Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2661 ATGGCTTTCAAGAAATTCTCCATTCTTATCAATCTTTTTGTATCCCATTTTCTTCCCTTCTTTTTGTTAATGACATCTTTGTCCTTAGCAGATGACCATGAATCCATTTGCCAATCAACAATAGACCCTTCTTATTGCAAAAACATGCTTGCAAATCAAAATGGCAACATATTTGATTATGGCCGTTTCTCATTCCAAAAATCAATATCCCAAACCCAAAAATTCCTAAACCAAGTTAACTCATATCTCCAAAATACACACACTTTGTCACAATCCACAATTTGGGCACTCCAAGATTGCACCTTTCTTTCTCAACAAAGCTTAGAGTATTTATCAAACACCTTCACCACAATCAATCAAACTAGTAATAATAATAATAATCTTCTTCCATCTTCACAAGCTGAAGATTTTCAAACATTTCTTAGTGGGGTTTTGACCAACCAACAAACTTGCTTAGACGGTTTATCATTACAAACCTCTACTTCTAATTCGGATCAAGATTTGAAGAATGAACTATCTTCATCATTATCCAATGACACAAAACTCCATAGTGTTTCCCTTGCTTTATTCACAAAAGCTTGGGTACCAAGCAAGAAAATCATAACATCATGGCCAAACAACAAGCACAACTTCAATTTCCATCATGGAAATCTACCACTGAAGATGTCCAAAAAAGCTCAAGAAATTTATGATCATGCTAGGAATTCCAAGCATGGGAGGAAATTGCTCCAAAATAATGCGAACAACGGCAGCAGCAGCGGCGACGATCAGAGTGTTTTGGTGAGTGATATTGTGGTTGTGAGCCAAGATGGGAGTGGAAACTTTACAAGCATAAATGATGCCATTGGTGCAGCACCAAATAATAGTGTTGCTAGTGATGGATACTTCTTTATCTTTGTAACTGAAGGTGTGTATGAAGAGTATGTTTCCATTGATAAGACCAAGAAGTACCTTATGATGGTTGGTGAAGGAATTAACCGCACAATCATTACTGGTAGTCACAATGTTGTTGATAATTTCACAACATTCAATTCCGCAACATTTGCTGTGGTAGGTCAAGGGTTTGTAGCGGTAAACATAACATTCCGCAACACTGCTGGACCAAGCAAGAACCAAGCAGTTGCTTTAAGAAGTGGTTCAGATTTGTCTACCTTTTATAGTTGCAGTTTTGAAGGATACCAAGACACGCTTTATACGCATTCTCTTAGACAATTTTATAGAGAGTGTGATATTTATGGTACAGTTGATTTCATATTTGGTAACGCTGCTGTGGTGTTTCAAGATTGTAACATCTATCCTCGCTTTCCAAACAAAGGACAGTTCAATACTATCACTGCACAAGGCAGAACCGATCCAAATCAAAACACAGGAACTTCGATTCAGAATGCAACCGTAAAACCTGCCGATGATTTAGCACCAAATGTTGGTAGTGTTCAAACATACCTTGGTAGGCCATGGAAGAATTATTCAGTGACAGTGTTCATGGAATCATTCATGGATGGTTTCATAAACTCTGCAGGTTGGCATGAATGGAGTGGTGATTTTGCGCTTAGTACATTGTACTATGCTGAATTCAACAACACTGGGAATGGTTCTGACACTTCTAACCGTGTTACATGGCCTGGTTATCATGTCATTAATGCTACCGATGCAGCTAATTTTACGGTTTCTAATTTCTTGAGTGGAGATAATTGGATTCCTCAAACTGGTGTTCCATATTTGAGTGGATTAAATTAA 1737 0.3771 MAFKKFSILINLFVSHFLPFFLLMTSLSLADDHESICQSTIDPSYCKNMLANQNGNIFDYGRFSFQKSISQTQKFLNQVNSYLQNTHTLSQSTIWALQDCTFLSQQSLEYLSNTFTTINQTSNNNNNLLPSSQAEDFQTFLSGVLTNQQTCLDGLSLQTSTSNSDQDLKNELSSSLSNDTKLHSVSLALFTKAWVPSKKIITSWPNNKHNFNFHHGNLPLKMSKKAQEIYDHARNSKHGRKLLQNNANNGSSSGDDQSVLVSDIVVVSQDGSGNFTSINDAIGAAPNNSVASDGYFFIFVTEGVYEEYVSIDKTKKYLMMVGEGINRTIITGSHNVVDNFTTFNSATFAVVGQGFVAVNITFRNTAGPSKNQAVALRSGSDLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNIYPRFPNKGQFNTITAQGRTDPNQNTGTSIQNATVKPADDLAPNVGSVQTYLGRPWKNYSVTVFMESFMDGFINSAGWHEWSGDFALSTLYYAEFNNTGNGSDTSNRVTWPGYHVINATDAANFTVSNFLSGDNWIPQTGVPYLSGLN* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2661 578 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Ahy12g2661 578 SUPERFAMILY Pectin lyase-like 261 576 IPR011050 -
Ahy12g2661 578 Pfam Pectinesterase 265 563 IPR000070 GO:0030599|GO:0042545
Ahy12g2661 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 193 IPR035513 -
Ahy12g2661 578 PANTHER PECTINESTERASE 23 576 - -
Ahy12g2661 578 Pfam Plant invertase/pectin methylesterase inhibitor 34 189 IPR006501 GO:0004857
Ahy12g2661 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 192 IPR035513 -
Ahy12g2661 578 SMART PMEI_2 28 189 IPR006501 GO:0004857
Ahy12g2661 578 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 23 576 - -
Ahy12g2661 578 Gene3D - 262 578 IPR012334 -
Ahy12g2661 578 CDD PMEI-like_3 35 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2661 Ahy-Chr12 116248766 116251931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2661 1 577 Carbohydrate Esterase AT4G02330 56.367 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2661 K01051 - gmx:100813051 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2661 12 116248766 116251931 Ahy12g2661 12 116248766 116251931 ECH