Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2658 ATGTTCATGGATTCATCAGAAATCGAATCCAATAATTCCAAGTTATATGCCAAAAACGGCATCCTCTTCCTTACCTTCACCGTACTCCTTTTCTTCCTCCTCCTCCTCATCATTTTCCTCCACACTTTCCGACACTCATGCTTTCCTATCCGCCGCCGTAACAGCCACCGTCGTCACCACCGCCACCGACACGCTGTTCCCGCCAGCAACGGTATCCACCCTTCCCTTCTTACTTCCCTCCCAACCTTCACACACCCACCTTCTTCTCCTTCCGCCGCCGGCGGCGGCGACAGCTGCGCCGTGTGCATGTCGGAGTTCGTCGCCGGCGACGAGGGCCGGGTCCTTCCGATTTGCCGCCACGCTTTTCATTCGCAATGCATAGATGCGTGGTTGGGTTCTCACTCGAGTTGCCCGCTTTGTAGAAAACCGGTTCATCCGGTTCAAGACGGTTCGGTCGTTATTGAACCGGGTCTGGAGAAGTGGTTTCCTGAACCGATTTGGTGCCCGAAGAAGAAACCGTTGGAGATGGAATTGGAATTGGAGAAAGTGCAGAAGATGAAGAATAGTAGTTACTGTATAAATATCATGGCTCTTTAA 597 0.5209 MFMDSSEIESNNSKLYAKNGILFLTFTVLLFFLLLLIIFLHTFRHSCFPIRRRNSHRRHHRHRHAVPASNGIHPSLLTSLPTFTHPPSSPSAAGGGDSCAVCMSEFVAGDEGRVLPICRHAFHSQCIDAWLGSHSSCPLCRKPVHPVQDGSVVIEPGLEKWFPEPIWCPKKKPLEMELELEKVQKMKNSSYCINIMAL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2658 198 PANTHER RING-H2 FINGER PROTEIN ATL64 11 148 - -
Ahy12g2658 198 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Ahy12g2658 198 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 147 IPR013083 -
Ahy12g2658 198 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 11 148 - -
Ahy12g2658 198 SUPERFAMILY RING/U-box 95 147 - -
Ahy12g2658 198 CDD RING-H2_PA-TM-RING 99 141 - -
Ahy12g2658 198 SMART ring_2 99 140 IPR001841 -
Ahy12g2658 198 Pfam Ring finger domain 97 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2658 Ahy-Chr12 116222607 116223475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2658 19 142 C3H Transcription Factor Family AT1G76410 46.825 3.42e-26 97.8