Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2623 ATGGCTGCTTCACTTGTTGGAGGAGCTTTTCTCTCTTCTTTTATCGGTATTCTTTTTAATCGGCTGTCCGATCCTGCCATCATCAAGATGATGCGAGGAAAGAAGGTTGACCAGAAGCTGCTTCAAAAGCTGGAGAACATTCTGAACGTGGTTGAAGCTGTGCTGAATGATGCAGAGAAGAAACAGATCACTGACCCTGCTGTCAAGAGGTGGCTTGAAAATCTCCAAGATGCTGTCTACGATGCTGATGACTTGTTGGATGAACTTGCCACCAAAGCTGCCAAACAGAAGGATCCACCAGGTAACTTACTGTCTCGCTTTCTCAATTTGCAAGATAGGGAGATGGTTACTAGGATTGAAGACATCATTGCTAGACTAGAAGATATCGCAAAACACAAAGATATTCTTCGTCTAGAAAAGATTGCAGCCAAGAACATGTCTGGGAGGATTCCATCAACCTCACTGGTTAAAAAATCGGATATATTTGTTGGAAGGGACAAAGAGCGAGATACCATAATGAAATTGTTATTAGATGATGTTAACAATGGTGAACTGTCTGTGATTCCCATCGTGGGCATGGGTGGGATAGGAAAAACTACTTTGGCTAAATTGGTTTACAATGAAGACATGGTGCTGCAAAAATTTAACGTGAAGGCATGGGTTTGTGTGGGTGAGGAGGAATTTGATGTTCTTAAGGTCACAAAGGCTGTGATAGAAAAAACTTGCAGTCCTTGTTACTCAAATGATTTAGATACAGCTCAAAATCATTTGAAGAATGCGCTAGCGAGGAAGAAATTCTTAGTTGTTCTGGATGATGTATGGAGCAGCAATCGTGAGGGTTGGGAAATTTTTCTAACTCCTTTTGAATGTGGAAGTGAGGGAGGCAAGATTCTTGTAACAACACGTCTTGATACGGTTGCTTCTATGGTGAAAACTAAACATAATGAAGATCACAATTTGAGTTTGTTGGATGAAGAACAATGCTGGTCAGTGTTTGCAAATCGTGCATGGGATCCTGCCGAATCCCGAGATCATTCAACCTTAAAAGAAATTGGTAGAAAAATTGTTAAAAAATGTAAAGGATTACCTTTGGCAGCTCAAACACTTGGAGGATTATTGAGAGGGAAAGATAATGAAAAGGATTGGAATGATGTTTTGAATAGTGAATTCTGGGAACTCTCTGAGGAGGATAGCGTGATTCTTCCTGCATTGAGAATCAGTTATTTCCACCTTCCTTCGTATTTAAAACGCTGCTTTGTTTACTGTTGTTTGTATCCAAAGGACTTTGGAAGAAATTGGTTATGA 1305 0.4023 MAASLVGGAFLSSFIGILFNRLSDPAIIKMMRGKKVDQKLLQKLENILNVVEAVLNDAEKKQITDPAVKRWLENLQDAVYDADDLLDELATKAAKQKDPPGNLLSRFLNLQDREMVTRIEDIIARLEDIAKHKDILRLEKIAAKNMSGRIPSTSLVKKSDIFVGRDKERDTIMKLLLDDVNNGELSVIPIVGMGGIGKTTLAKLVYNEDMVLQKFNVKAWVCVGEEEFDVLKVTKAVIEKTCSPCYSNDLDTAQNHLKNALARKKFLVVLDDVWSSNREGWEIFLTPFECGSEGGKILVTTRLDTVASMVKTKHNEDHNLSLLDEEQCWSVFANRAWDPAESRDHSTLKEIGRKIVKKCKGLPLAAQTLGGLLRGKDNEKDWNDVLNSEFWELSEEDSVILPALRISYFHLPSYLKRCFVYCCLYPKDFGRNWL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2623 434 Pfam Rx N-terminal domain 10 103 IPR041118 -
Ahy12g2623 434 PRINTS Disease resistance protein signature 187 202 - -
Ahy12g2623 434 PRINTS Disease resistance protein signature 359 373 - -
Ahy12g2623 434 PRINTS Disease resistance protein signature 260 274 - -
Ahy12g2623 434 Gene3D - 322 411 IPR042197 -
Ahy12g2623 434 Coils Coil 41 61 - -
Ahy12g2623 434 PANTHER DISEASE RESISTANCE PROTEIN RP 34 429 IPR044974 GO:0006952
Ahy12g2623 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 422 IPR027417 -
Ahy12g2623 434 Gene3D - 140 316 IPR027417 -
Ahy12g2623 434 CDD RX-CC_like 38 131 IPR038005 -
Ahy12g2623 434 Gene3D - 15 135 - -
Ahy12g2623 434 PANTHER OS05G0414200 PROTEIN 34 429 - -
Ahy12g2623 434 Coils Coil 72 92 - -
Ahy12g2623 434 Pfam NB-ARC domain 169 388 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2623 Ahy-Chr12 115826304 115827608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2623 184 425 WRKY Transcription Factor Family AT5G45050 27.626 6.52e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2623 - - ahf:112730654 870.537