Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2616 ATGTTGTGTACGATGCTGAAGACATACTTGATGAAGTCACCACCAAAGCTGCCATTCAAAAGGTTCAAGGAGATACCGGTGGAGGACATGTCATGGAGGATCCCCTCAACATCTCTGGTTGGTGTGCATCAAATATATGGCAGGGACCAAGACAGGGAGGCCATAGTAAAACTGTTGTTAGATGTTACCAATGACGGTGGAATATCCGTGATTCCTATGGTCGGCATGGGTGGAATAGGAAAGACTACTTTGGCTCAGATGGTTTACAATGATGACCGAGTGAAACAAAAATTTGATGTTAAGGCATGGGTTTGTGATGGGCAAGAAGAATTTGACGTTCTTAAGGTGACAAAGGCTGTGATGGAAGCAACTTCTAGTTCTTGCAACTCAACTGAGTTGAACAAAATTCAGGAGAGTTTGAAGGAAGTCCTAGCAGGGAAGAAGTTGTTGGTTGTTTTGGACGACATGTGGAGTAACAATTATGATGCCTGGATAAGTTTTCTAAAGCCTTTTAAATCTAGTAACGGGGGTGTTAAGATTCTTGTAACAACCCGTCTTGATTCGATTGCTGATATGGTGAAAACTATTCCAGCTTACCATTTGAGTTTGTTGGGTGATGATCACTGCTGGTCAGTGTTTGCAGATCACGCATGTCTTAATTCTGCTGAACCTCATATCCGTTCTGGTTTAGAAGTAGTTGGTCGAAAAATTGTCAAAAAGTGTAATGGGTTAGCTTTGGCTGCTCAAACACTTGGAGGTTTATTAAGAGCAAGAAAAGAAGCAGCGGATTGGGAGTTTATATTGAGGAGTGAAATTTGGGAATTTCCCAAAAAAGATAGTGGGATTCTTCCTGCATTGAGAATAAGTTATCACTACCTCCCTTCATACTTAAAACGTTGCTTTGTATATTGTTCTTTATTCCCAAAAGACTATGAATTCGAAAGAGATGAACTGGTGTTACTGTGGATGGCAGAAGGTCTTTTGCAGCAACCAAATAGTAGTGGAGGTACTTTAGAAGAAGTCGGTTATAAATATTTTAACGATTTGGTTTCGAGATCATTTCTCCAACATTCTGAAACCGATGAAAATTCATTCGTGATGCACGATCTCATGCATGATTTAGCAATATTCTATGGTGGAAAGTTCTTTTGTAGAACCTTAGAACTCAAAACCGCAGACAAGCATGAGGCTTATCCTCGTCATCTTTCTTATAGTCTTAACATCCGTGATTCGCTCTCAAAGTTCTTGGAAGCATGTGATAATTTACAAGATACAAGGACATTGTTGAAAATCAATGCTGGTATCAGGCATGATTCCTCAAAGAAAATCGATCCTTGTCGCTTACTTGCACAATTGAAGCACGTAAGGGTTCTGTCATTTGAATTCTTTCCTCGTGACCATAATTCGTTGCCCGATTCAATAGGTGATTTGATCCATTTGCGTTATTTGGATCTCTCTGATTCACCTATCGTGACATTGCCAGAGTCAATGTGCAAATGTTATAATTTACAAACACTGAAGTTGAGTGATTGTGAAAGACTAGAAAAGCTTCCAAGCAACATGCAGGATCTTGTAAATTTGCTTCATTTGGATCTCTCTTGTACGGCAATTGAGGTATTGCCCGAGTCATTGAGCAAATTGCATAATTTACAAACGTTGAAGTTGAGAGAGTGTGAAAACCTGAAAAAGCTTCCAAGCAAGATGCAAGATCTTATAAATTTGCACCATCTCGATATTGAAGGTACTAAAATAGAAGAGATGCCGAAAGGGATGAGCAAATTAAAAGACCTGCAGATTTTATGTTACTATATTGCCGGCAAGCATGAAGAGAATGGGATAGGGGAATTGGGAGGACTTGTAAATCTTCAAGGGTTATTTCGTCTTAAGAAATTAGAGAATGTGGTTGATAGCAGTGAAGCTTGGAAGGCAAGGATGGTTGATAAGAAATACATCAGTGATCTACGTTTGAAGTGGTCATCAGGTGAAGATAGTGATATTGTTGATTCCCAAATCGAAAAAGATGTGCTTAGCAAATTAGAACCTCACAATGACCTTAAATATCTAACAATAAAGGGTTACAGGGGTACAGTGTTTCCGGATTGGGTAGGGCAGTCTAGGTACCACAACATGACTGAGTTGGAGCTGAATGGATGCAGGAATTGTTTGGTGTTTCCTTCCCTTGGACAGTTACCCTCTCTGGAGACGCTGCTCATTGCAGGGTTTGACAAGGTGAAGATGATTGGTGGCTCATTCTATAAGGCTGATGCAACTCATCAGCATCAGGAGACACCCTTCCGATCCCTTAAATATCTCTCATTCTATCAAATGAGTTGCTGGGAGGAATGGGAGTCATATGAATGTGATGATGATGATGATGCACCATTTCCGAAACTTGAGGAATTCTATATATCGCAGTGTCCTAAGTTAAGAGGAGATTTGCCCACTTTCCTTCCGTCTTTGAAAAAACTTGTCATATCAGGATGCGAGGAGCTTGGTTGTTATGTGCCAAGAGCTCCCATCCTACGCTCATTAAGAATATCTGGCAAACAGGAAGCAAGAACGCGGGACCTACCACTTTCCATGTTGGAGACACTAGTAATTAATGGAGAGCAGCTTGTGAATTCTCTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCATAGAGCTACACATCTCAGAGTGCTCATCAGCCATATCATTTCCAGGGGATTCTTTGCCCCCTTCATTGGAAGTGCTATTAATCAACGATTGCAAGAATGTAGAATTCCCAATGCAACACCAACAACATGAGTCACTAATTAGTCTTACAATAAACAACAGCTGTGATTCGCTTACATCCTTCGCATTCCCAGCGTTCCCAAATCTCAAGTATCTCACAATCGCAAGTCGTGAAAATTTGACATCTCTGGAGGTGTCACAGTCACAGTCCCTCAAAGAATTATGGATTGAAAAATGTCCTAAGCTGGAGAACATAACAAGGCTGCCTGCCTCTTTACGGGAGCTCAAGATCTATAGATGTCAGTTGTTGGGTGAAGGCATAGAGAGGAAGGACCCCCACATTTGGCCATCCATTTCCCACATCACCTACATTAAAGTTGATAGTAATCTGATTGACAAAGACTCAACATCTTAA 3138 0.4092 MLCTMLKTYLMKSPPKLPFKRFKEIPVEDMSWRIPSTSLVGVHQIYGRDQDREAIVKLLLDVTNDGGISVIPMVGMGGIGKTTLAQMVYNDDRVKQKFDVKAWVCDGQEEFDVLKVTKAVMEATSSSCNSTELNKIQESLKEVLAGKKLLVVLDDMWSNNYDAWISFLKPFKSSNGGVKILVTTRLDSIADMVKTIPAYHLSLLGDDHCWSVFADHACLNSAEPHIRSGLEVVGRKIVKKCNGLALAAQTLGGLLRARKEAADWEFILRSEIWEFPKKDSGILPALRISYHYLPSYLKRCFVYCSLFPKDYEFERDELVLLWMAEGLLQQPNSSGGTLEEVGYKYFNDLVSRSFLQHSETDENSFVMHDLMHDLAIFYGGKFFCRTLELKTADKHEAYPRHLSYSLNIRDSLSKFLEACDNLQDTRTLLKINAGIRHDSSKKIDPCRLLAQLKHVRVLSFEFFPRDHNSLPDSIGDLIHLRYLDLSDSPIVTLPESMCKCYNLQTLKLSDCERLEKLPSNMQDLVNLLHLDLSCTAIEVLPESLSKLHNLQTLKLRECENLKKLPSKMQDLINLHHLDIEGTKIEEMPKGMSKLKDLQILCYYIAGKHEENGIGELGGLVNLQGLFRLKKLENVVDSSEAWKARMVDKKYISDLRLKWSSGEDSDIVDSQIEKDVLSKLEPHNDLKYLTIKGYRGTVFPDWVGQSRYHNMTELELNGCRNCLVFPSLGQLPSLETLLIAGFDKVKMIGGSFYKADATHQHQETPFRSLKYLSFYQMSCWEEWESYECDDDDDAPFPKLEEFYISQCPKLRGDLPTFLPSLKKLVISGCEELGCYVPRAPILRSLRISGKQEARTRDLPLSMLETLVINGEQLVNSLFEAMTHTQPTSLIELHISECSSAISFPGDSLPPSLEVLLINDCKNVEFPMQHQQHESLISLTINNSCDSLTSFAFPAFPNLKYLTIASRENLTSLEVSQSQSLKELWIEKCPKLENITRLPASLRELKIYRCQLLGEGIERKDPHIWPSISHITYIKVDSNLIDKDSTS* 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2616 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 304 IPR027417 -
Ahy12g2616 1045 Gene3D Ribonuclease Inhibitor 399 837 IPR032675 -
Ahy12g2616 1045 PRINTS Disease resistance protein signature 70 85 - -
Ahy12g2616 1045 PRINTS Disease resistance protein signature 241 255 - -
Ahy12g2616 1045 PRINTS Disease resistance protein signature 545 561 - -
Ahy12g2616 1045 PRINTS Disease resistance protein signature 143 157 - -
Ahy12g2616 1045 SUPERFAMILY L domain-like 366 842 - -
Ahy12g2616 1045 Gene3D - 204 288 IPR042197 -
Ahy12g2616 1045 Gene3D Ribonuclease Inhibitor 838 1022 IPR032675 -
Ahy12g2616 1045 Gene3D - 289 376 IPR036388 -
Ahy12g2616 1045 PANTHER OS05G0414200 PROTEIN 39 532 - -
Ahy12g2616 1045 Pfam NB-ARC domain 50 268 IPR002182 GO:0043531
Ahy12g2616 1045 PANTHER DISEASE RESISTANCE PROTEIN RP 39 532 IPR044974 GO:0006952
Ahy12g2616 1045 Gene3D - 31 197 IPR027417 -
Ahy12g2616 1045 PANTHER DISEASE RESISTANCE PROTEIN RP 537 901 IPR044974 GO:0006952
Ahy12g2616 1045 SMART LRR_typ_2 524 547 IPR003591 -
Ahy12g2616 1045 SMART LRR_typ_2 571 594 IPR003591 -
Ahy12g2616 1045 SMART LRR_typ_2 477 500 IPR003591 -
Ahy12g2616 1045 PANTHER OS05G0414200 PROTEIN 537 901 - -
Ahy12g2616 1045 SUPERFAMILY L domain-like 796 1032 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2616 Ahy-Chr12 115715495 115720910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2616 68 642 WRKY Transcription Factor Family AT5G45050 23.856 5.35e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2616 - - aip:107626171 1557.35