Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2600 ATGGCAGCAATGAAACTCCATGGAAACCCTATGTCACCAAACTCCATGCGAGTGGCTGCTGTCTTGTATGAGAAAGAGCTTGACTTTGAGTTTGTTACTATTGACATGAAGAATGGTGAACATAAAAAGGAGCATTTTCTTTCTCTAAATCCATTTGGTCAAGTTCCAGCATTTGAAGATGGAGACTTGAAGCTCTTTGAATCAAGGGCAATAACAAAATACATTGCACATGAATATGCTGATAAGGGGACTCAGCTAATAGTAACCAATGATTCAAAGAAGATGGCTATAATCACTCTATGGCTTGAAGTTGAAGCTCAACAATATGATCAAGTAGCTCCGAAGCTTATATGGGAGCTTCATGTTAAGCCACTCTTTGGCATCCCAACAGACCCAAAAGTTGTTGAAGAGAATGAATCAAAGCTTAGTAGTGTTCTTGGAATATATGAGAAGAGGCTCTCTGAGACAAAGTATTTGGGTGGTGAATGTTTCACTTTGGCTGATCTTCATCACCTTCCAACCCTTCATTTCTTGATGTTAACACAGGTGAAGAAGCTGATTGAGCCTCTGCCACGTGTCAGTGCTTGGGTGGCTGATATTACAGCTAGACCAGCTTGGTCTAAGGTCACTGACATGCTCAATTAA 645 0.4078 MAAMKLHGNPMSPNSMRVAAVLYEKELDFEFVTIDMKNGEHKKEHFLSLNPFGQVPAFEDGDLKLFESRAITKYIAHEYADKGTQLIVTNDSKKMAIITLWLEVEAQQYDQVAPKLIWELHVKPLFGIPTDPKVVEENESKLSSVLGIYEKRLSETKYLGGECFTLADLHHLPTLHFLMLTQVKKLIEPLPRVSAWVADITARPAWSKVTDMLN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2600 214 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 213 - -
Ahy12g2600 214 CDD GST_C_Phi 93 209 IPR034347 -
Ahy12g2600 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Ahy12g2600 214 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Ahy12g2600 214 Gene3D Glutaredoxin 2 87 - -
Ahy12g2600 214 CDD GST_N_Phi 3 77 - -
Ahy12g2600 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 214 IPR010987 -
Ahy12g2600 214 Gene3D - 90 214 - -
Ahy12g2600 214 SFLD Main (cytGST) 1 212 - -
Ahy12g2600 214 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Ahy12g2600 214 Pfam Glutathione S-transferase, C-terminal domain 125 204 IPR004046 -
Ahy12g2600 214 SFLD Main.5: Phi-like 1 212 - -
Ahy12g2600 214 SUPERFAMILY GST C-terminal domain-like 91 209 IPR036282 -
Ahy12g2600 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2600 Ahy-Chr12 115487250 115489392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2600 1 209 Glutathione S-transferase Gene Family AT1G02930 55.502 5.85e-83 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2600 K00799 - gmx:100799868 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2600 12 115487250 115489392 Ahy2g2253 2 98663357 98665312 hybridization