Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2594 ATGTCAAACATTTCAGGTGAAGATAATAATAATAATAATGGTAGTTTCTCCTCAGAAGAACAACTACAGGAGAATGAAGAACAGCAACAGTTGCAATTACAAAATCACCCTCATCATCATCATCATGGTTCAAGTTCTTCTAGTGCTTGCAAAAACAACAACTCCACAAGTCAAGAACAAAAGCAACAAGTTGGAATCAAGAAGAAAAGAAACCAACCTGGAAATCCAGTTACAGATCCAAATGCAGAAGTGATTGCATTATCACCAACCACATTAATGGCAACAAATAGATTCATATGTGAGATATGCAACAAAGGGTTTCAGAGGGACCAAAACCTTCAGTTACATAGGAGAGGTCACAATCTACCATGGAAGCTAAGGCAAAGAGCAACAACAGAAGAGGCTATGAAGAAGAGGGTGTACGTGTGCCCCGAAAAATCGTGTGTGCACCATAACCCTGCCCGAGCACTGGGGGATCTCACTGGGATAAAGAAACATTACAGCAGGAAACATGGTGAGAAGAAGTGGAAATGTGACAAATGTTCAAAGAAATATGCTGTTCAATCTGATTGGAAGGCTCATCAGAAAACATGTGGCACTAGAGAATATAAATGTGATTGTGGAACTATATTCTCCAGAAGGGACAGCTTCATAACACACAGGGCCTTTTGTGATGCATTAACTGAGGAAAACAACAGAATAAATCAACAAGGATTAACAAATGGGGTGCCACAAAACTTGCAAAATGAACAAGTCTCTGATCTTATAGCCACAATGCCCCTAAGCAACAGTAATGCATCAGAACTCAACAGCAGTAACCATAACAATCCACTTAGAACACTCTCACAAGAGATTGTACCTGTGCCATTCAAGTCCATGAGCATTGGTGGGGGCATTTTCTCCCCAACAAGTTCATCATCAGGTACACTATTTGGTGGTCCAAAGAGCATGCACGCTCTCCCTACCTCTTCTTCAAGCCTTCAACTCAGTTCCAACAACTCCACTGGTTTCAATTACTTCCAAGATAGCAGCAAGAACTTGGGTCTTGTTTCCAGCTCAGCTCACATGTCTGCAACTGCATTATTGCAGAAAGCAGCACAAATGGGTGCTGCTGCAAGCAGCAACAGCATTAACTCCCCCATGATGCAAAAACCCTTTGTTACTACCATGGCCGGTCCTGACCAAGTTTCTGGTGCTGCTACTGCTATGCAGCACCATAACCGTAATAACCCTCCTTCCTATGATCATCACTTCAATCCACAGGCTGATCAATTTTTTCATAAAAGGCAGCAAGAAATGCCACTGATATTTGAAGCTAATAACAATAGTAATGATGGGTCAACAACAAATAATGATATAGGAATGCTTAGCACAATGTTCATGGGAAGTGATCACAATACACAAGAGGTTGGTGCTACTAGTTTGGTCCATGAAAGAGACCTTGCAGAAGGAAATAACCAAATGGGGGCACCAAGGTTTGGTGTCAGTAATGACATGAAAACAGTTCATGATTTCTTGGGAGTTGGAGGGTCAACTTCAAGAGCTACAGGGAATTTGCATGAACCTCAGAGACATCATCATCATCAACAAGAACAACAGAGATTGGAATTAGAAGCATTAAGCCAACAGAGGTTACCACTTATTAATCACTTTCAGCATCACATTCCACATGGAGATTCAACTATGGAGAAATCTGTTTGGGACATATGA 1710 0.4129 MSNISGEDNNNNNGSFSSEEQLQENEEQQQLQLQNHPHHHHHGSSSSSACKNNNSTSQEQKQQVGIKKKRNQPGNPVTDPNAEVIALSPTTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRATTEEAMKKRVYVCPEKSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNRINQQGLTNGVPQNLQNEQVSDLIATMPLSNSNASELNSSNHNNPLRTLSQEIVPVPFKSMSIGGGIFSPTSSSSGTLFGGPKSMHALPTSSSSLQLSSNNSTGFNYFQDSSKNLGLVSSSAHMSATALLQKAAQMGAAASSNSINSPMMQKPFVTTMAGPDQVSGAATAMQHHNRNNPPSYDHHFNPQADQFFHKRQQEMPLIFEANNNSNDGSTTNNDIGMLSTMFMGSDHNTQEVGATSLVHERDLAEGNNQMGAPRFGVSNDMKTVHDFLGVGGSTSRATGNLHEPQRHHHHQQEQQRLELEALSQQRLPLINHFQHHIPHGDSTMEKSVWDI* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2594 569 Gene3D Classic Zinc Finger 77 151 - -
Ahy12g2594 569 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 120 IPR013087 -
Ahy12g2594 569 MobiDBLite consensus disorder prediction 1 82 - -
Ahy12g2594 569 Gene3D Classic Zinc Finger 154 234 - -
Ahy12g2594 569 MobiDBLite consensus disorder prediction 46 62 - -
Ahy12g2594 569 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 36 532 - -
Ahy12g2594 569 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 36 532 - -
Ahy12g2594 569 SUPERFAMILY beta-beta-alpha zinc fingers 97 197 IPR036236 -
Ahy12g2594 569 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Ahy12g2594 569 SMART c2h2final6 98 120 IPR013087 -
Ahy12g2594 569 SMART c2h2final6 141 171 IPR013087 -
Ahy12g2594 569 SMART c2h2final6 176 196 IPR013087 -
Ahy12g2594 569 MobiDBLite consensus disorder prediction 1 32 - -
Ahy12g2594 569 MobiDBLite consensus disorder prediction 509 531 - -
Ahy12g2594 569 Pfam Zinc-finger double-stranded RNA-binding 98 120 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2594 Ahy-Chr12 115370551 115375320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2594 67 377 IDZ Gene Family AT3G50700 56.061 1.71e-108 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy12g2594 zf-C2H2_jaz 8.50E-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2594 - - ahf:112730641 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2594 12 115370551 115375320 Ahy12g2594 12 115370551 115375320 ECH