Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2588 ATGGCTGCAAGATTTGTGGGAGAAGCTTTTCTCAACTCTGCACTTGGCACTATCTACGACATGCTGATTTCACCCTTACTTGTCAACTTCATCCAGCGAAAGAAGCTTAACCGGAAGCTGGTTGAGAAGCTGGAGACAGTTCTGAAGGCTGCTCATGCTGTGATCAATGACGCCGAGCGGAGGCAGATCGAAGAGGAAGCTGTGAAGGACTGGCTGGACAGGCTGAAGTATGCTGTGTACGATGCTGAAGACATACTTGATGAAGTCACCACCAAAGCTGCCATTCAAAAGGTTCAAGGTAACTCTCTGTCTCGCTATGTCAATTTGCATGGTGATGGTGAGATAGTAACCAAGATAGAAGAGATCATTGATGCATTAGAGTCAATTGTAAATGAGAAAGATGGTCTTGGCTTGAAGGAGATACCGGTGGAGGACATGTCATGGAGGATCCCCTCAACATCTCTGGTTGGTGTGCATCAAATATATGGCAGGGACCAAGACAGGGAGGCCATAGTAAAACTGTTGTTAGATGTTACCAATGACGGTGGAATATCCGTGATTACTATGGTCGGCATGGGTGGAATAGGAAAGACTACTTTGGCTCAGATAGTTTACAATGATGACCGAGTGAAACAAAAATTTGATGTTAAGGCATGGGTTTGTGATGGGCAAGAAGAATTTGACGTTCTTAAGGTGACAAAGGCTGTGATGGAAGCAACTTCTAGTTCTTGCAGCTCAACTGAGTTAAACACAATTCAGGAGAGCTTGAAGAAAGTCCTAGCAGGGAAGAAGTTGTTGGTTGTTTTGGATGACATGTGGAGAAACAATTATGATGCCTGGATAAGTTTTCTAAAGCCTTTTAAATCTAGTAACGGGGGTGTTAAGATTCTTGTAACAACCCGTCTTGATTCCACTGCTGATATGGTGAAAACTCTTCCAACTTACCATTTGAATTTCTTGGGTGATGATCACTGCTGGTCAGTGTTTGCAGATCATGCATGTCTTAATTCTGCTGAACCTCATATCCGTTCTGATCTAGAAGTAGTTGGTCGAAAAATTGTCAAAAAGTGTAATGGGTTAGCTTTGGCTGCTCAAACACTTGGAGGTTTATTAAGAGCAAGAAAAGAAGTAGCGGATTGGGAGTTTATATTGAGGAGTGAAATTTGGGAACTTCCCAAAAAAGATAGTGGGATTCTTCCTGCATTGAGAATCAGTTATCACTACCTCCCCTCGTACTTAAAACGTTGCTTTGTTTATTGTTCTTTATTCCCAAAAGACAATGAATTCAAAAGAGATGAACTGGTGTTATTGTGGATGGCAGAAGGTCTTTTGCAGCGACCAAAGAGTGGCAGCACTTTAGAAGAAGTTGGTTCTAAATATTTTAATGATTTGGTTTCCAGATCATTTTTCCAACATTCTAACACTGATGAAAATTTATTTGTGATGCACGATCTCATGCATGATTTAGCAATATTCTACGGTGGAAAGTTCTTTTTGAGAAACTTTGAACTCAAAACTGCAGACAAGCATGATGCTTGTCCTCGTCATTTTTCAAATGGTCTTGTAATCGATGATTCGTTATTCTCAGAGATTTCGGAAGTACGTGATTGTTTAAAAAATACAAGGACATTGCTGGATATCAGTTTTAAAACATGCAATGGTTACACAGAGGAAATTGATCCTTGTCGCTTACTTGCACAGTTGAAGCACGTACGGGTTTTGTCATTTAAATCCCTTCCTCCTGATGAGCTTGATTCAATAGGTGATTTGATCCATTTGCGTTATTTGGATCTCTCTTATTCATCTATCGAGACATTGCCAGAGTCAATGTGCAAATTTTATAATTTACAAACACTGAAGTTGAATGATCGTGATCGTCTAGAAAAGCTTCCAAACAACATGCAGGATCTTGTAAATTTACGTCATTTGGATCTCTCTGGTACGTCTATTGTGGAATTACCCGAGTCATTGAGCAAATTGTATAATTTACAAACATTAAACTTGAGTGCTTGTGAAGAACTAAAAAAGCTTCCAAGCAAGATGCAAGATCTTGTAAATCTGCGCCATCTCGACATTGAAGATACTAATTTAGAAGAGATGCCAAAAGGGATGAGCAAATTAAAAGATTTGCAGATTCTGAGTTACTACATTGTTGGCGAGCATGAAGAGAATGGGGTAGGAGAATTGGGAGAACTTGTAAATCTTCAAGGGTCATTTCATATTAGGAAATTAGAGAATGTCGTTAATAGCAGTGAGGCTTGGAAAGCAAGGATGTTTGATAAGAAACACATCAATGATCTAAGGTTGCAGTGGAGATCAGTTGAATATGGTGATATTGTTGATTCCGAAATCGAAAAAGATGTACTTGACAAATTACGTCCTCACAAAGACTTGAAGAAGCTATTCATCTGGTGTTACAGAGGTACGATGTTTCCGGATTGGGTAGGGCAGTGTTCGTACCACAACATGACTTGGTTGGAGCTGAGGGGATGCAGGAATTGTTGGGTGGTTCCTTCACTTGGACAGTTACCCTCTCTGGAGAGGCTGGTCATTAGAGAGCTCGACAAGGTGAAGAAGATTGGTGGGTCATTCTATAAGGGTGATGGAACTCATCAGCATCAGGAGACACCCTTCCGATCCCTTAAATATCTGACTATTGAAAAACTGCCTTGCTGGGAGGAATGGGAGTCATATGAATGTGATGATGATGATGATGCACCATTTCCGAAACTTGAGACACTTGAGATATGGGATTGTCCTAAGTTAAGAGGAGATTTGCCCACTTTCCTTCCGTCTTTGAAACAAATTTACATTTCAGGATGCGAGGAGATTGGTTGTTATCTGCCAAGAGCTCCCATCCTACGCTCATTAAGAATAGATGGCAAACAGGAAGCAAGAATGCGGGAGCTACCACTTTCCATGTTGGAGACACTAATCGTTAATGGAGAGCAGCAGGTGGAGTATGTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCAGTTCTTTACAAATCTCAAAATGCTCATCAGTGGTATCATTTCCAGGGGATGCTTTGCCCCCTTCGTTGAAACAGTTGAGCATATACGATTGCAAGAACGTAGAATTCCCAATGCAACACCATCAACATCACTCGCTACAGAGATTAGAAATACACAACAGCTGCAATTCGCTTACATTCTTCGCATTGCCAGCGTTCCCAAATCTCGATTATCTTAGCATCAAAGAACTTGAAAATTTGACATCTCTGGAGCTGTCACAGTCACAGTCCCTCCTAAGATTATCAATTTCAGATTGCCCTAAGCTGGAGAACATAATAAGGCTGCCTGCCTGTTTAAGGGAACTCAAAATCAGAGAATGTGGGTTGTTGGGTGAAGGCATAGAGAGGAAGGACCCCCACATTTGGCCATCCATTTCCCACATCCCCTACATTAAAGTTGACGGGAAACAGATTCGCAATGACTCAACATCTTAA 3477 0.4127 MAARFVGEAFLNSALGTIYDMLISPLLVNFIQRKKLNRKLVEKLETVLKAAHAVINDAERRQIEEEAVKDWLDRLKYAVYDAEDILDEVTTKAAIQKVQGNSLSRYVNLHGDGEIVTKIEEIIDALESIVNEKDGLGLKEIPVEDMSWRIPSTSLVGVHQIYGRDQDREAIVKLLLDVTNDGGISVITMVGMGGIGKTTLAQIVYNDDRVKQKFDVKAWVCDGQEEFDVLKVTKAVMEATSSSCSSTELNTIQESLKKVLAGKKLLVVLDDMWRNNYDAWISFLKPFKSSNGGVKILVTTRLDSTADMVKTLPTYHLNFLGDDHCWSVFADHACLNSAEPHIRSDLEVVGRKIVKKCNGLALAAQTLGGLLRARKEVADWEFILRSEIWELPKKDSGILPALRISYHYLPSYLKRCFVYCSLFPKDNEFKRDELVLLWMAEGLLQRPKSGSTLEEVGSKYFNDLVSRSFFQHSNTDENLFVMHDLMHDLAIFYGGKFFLRNFELKTADKHDACPRHFSNGLVIDDSLFSEISEVRDCLKNTRTLLDISFKTCNGYTEEIDPCRLLAQLKHVRVLSFKSLPPDELDSIGDLIHLRYLDLSYSSIETLPESMCKFYNLQTLKLNDRDRLEKLPNNMQDLVNLRHLDLSGTSIVELPESLSKLYNLQTLNLSACEELKKLPSKMQDLVNLRHLDIEDTNLEEMPKGMSKLKDLQILSYYIVGEHEENGVGELGELVNLQGSFHIRKLENVVNSSEAWKARMFDKKHINDLRLQWRSVEYGDIVDSEIEKDVLDKLRPHKDLKKLFIWCYRGTMFPDWVGQCSYHNMTWLELRGCRNCWVVPSLGQLPSLERLVIRELDKVKKIGGSFYKGDGTHQHQETPFRSLKYLTIEKLPCWEEWESYECDDDDDAPFPKLETLEIWDCPKLRGDLPTFLPSLKQIYISGCEEIGCYLPRAPILRSLRIDGKQEARMRELPLSMLETLIVNGEQQVEYVFEAMTHTQPTSLSSLQISKCSSVVSFPGDALPPSLKQLSIYDCKNVEFPMQHHQHHSLQRLEIHNSCNSLTFFALPAFPNLDYLSIKELENLTSLELSQSQSLLRLSISDCPKLENIIRLPACLRELKIRECGLLGEGIERKDPHIWPSISHIPYIKVDGKQIRNDSTS* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2588 1158 Gene3D Ribonuclease Inhibitor 521 944 IPR032675 -
Ahy12g2588 1158 PANTHER OS05G0414200 PROTEIN 30 645 - -
Ahy12g2588 1158 Coils Coil 41 61 - -
Ahy12g2588 1158 SUPERFAMILY L domain-like 481 946 - -
Ahy12g2588 1158 PANTHER DISEASE RESISTANCE PROTEIN RP 650 1014 IPR044974 GO:0006952
Ahy12g2588 1158 PANTHER DISEASE RESISTANCE PROTEIN RP 30 645 IPR044974 GO:0006952
Ahy12g2588 1158 Gene3D - 14 127 - -
Ahy12g2588 1158 Pfam Rx N-terminal domain 11 102 IPR041118 -
Ahy12g2588 1158 CDD RX-CC_like 7 129 IPR038005 -
Ahy12g2588 1158 Pfam NB-ARC domain 166 384 IPR002182 GO:0043531
Ahy12g2588 1158 SMART LRR_typ_2 684 707 IPR003591 -
Ahy12g2588 1158 SMART LRR_typ_2 590 613 IPR003591 -
Ahy12g2588 1158 SMART LRR_typ_2 637 660 IPR003591 -
Ahy12g2588 1158 Gene3D - 405 491 IPR036388 -
Ahy12g2588 1158 Gene3D - 320 404 IPR042197 -
Ahy12g2588 1158 Gene3D Ribonuclease Inhibitor 950 1130 IPR032675 -
Ahy12g2588 1158 PANTHER OS05G0414200 PROTEIN 650 1014 - -
Ahy12g2588 1158 PRINTS Disease resistance protein signature 186 201 - -
Ahy12g2588 1158 PRINTS Disease resistance protein signature 259 273 - -
Ahy12g2588 1158 PRINTS Disease resistance protein signature 658 674 - -
Ahy12g2588 1158 PRINTS Disease resistance protein signature 357 371 - -
Ahy12g2588 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 420 IPR027417 -
Ahy12g2588 1158 SUPERFAMILY L domain-like 909 1125 - -
Ahy12g2588 1158 Gene3D - 147 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2588 Ahy-Chr12 115328682 115334640 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2588 184 706 WRKY Transcription Factor Family AT5G45050 23.423 3.05e-13 72.8