Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2571 ATGATGGCTTTGAATTCAAGCTTAGGTGTTATGAAATTGGAGTTGTTTTCGTCGTCGCCGGATTCAGCCTCTGTGGATTCCATTACTCTGTTTGTGCTTCTTCTTTGTGCTTGCGTTCTCATTGGCCATCTTCTAGAAAAGAGTCGATGGATGACTGAGTCAGTTGTTGCCCTAATTATTGGTCTTTTCACCGGGACCATAATTCTAATGACAACTAGGGGGAAAAGTTCGCACATTTTGGTGTTCGATGAGGAGCTTTTCTTTATTTATCTTCTTCCGCCAATTATATTCAATGCAGGGTTCCAAGTGAAAAAGAAACAATTCTTTCGGAACTTTTTGGCCATTATTTTGTATGGTGTTATTGGAAGTTTAATATCATTTCTCATCGTATCTCTTGGTTCCTTACAGTTGTTCAAAACATTGGATCTGGATTTGATGGAATTGGCAGATTATTTTGCACTCGGAGCTGTATTCTCAGCGACAGATTCTGTGTGCACATTACAGGTGCTTAATCAGGAAGAGACACCTCTCCTATATAGTCTAGTTTTCGGTGAAGGCGTGGTCAATGATGCAACTTCCGTGGTTCTTTTCAACGCAATCCAGAAATTCGACCTCTCACATATCACCTCAGTCAATGTCATGCAGTTCATCGGCAATTTCTTTTATTTATTCCTGACAAGCACTTTCCTGGGAGTAGCGGTTGGCTTGCTCAGTGCTTACATTATAAAGAAGTTGTACTTTGGCAGGCATTCAACTGACAGAGAAATCGCGCTTATGATCCTGATGGCTTACTTCTCTTATATGTTGGCTGAACTTCTTGATTTGAGTGGGATCCTTACTGTGTTCTTTTGTGGGATTGTCATGTCACACTATACCTGGCATAATGTTACCGAAAGTTCTAGGATCACAAGCAGGCATGCTTTTGCAACCTTTTCTTTCGTGTCCGAGATTTTCATCTTCTTGTATGTTGGTATGGATGCCTTGGACATGGAGAAGTGGAGATTCGCCAGCAATAGTCCATGGACATTACTTGGGGCCTGTGGAATACTGCTTTGCTTGGTTCTGCTCGGAAGGGCCGCTTTCGTGTTCCCCCTTTCATTCATAGCTAATTTGTTCAGGAAATCCAAGGCTGATAAGATTGCATTCAAGCAGCAGTTTGTAATATGGTGGGCCGGGCTCATGCGAGGCGCTGTCTCCATTGCACTTGCATATAATAAGTTTACTAGAAAGGGGCATACTCAACTGCAAGGGAATGCTATCATGATCACCAGCACCATCACAGTTGTTCTATTCACTAATGTGGTGGGTGGATTACTAACCAAGCCTCTAATAAGGTCATTGCTCGGTGGGAACTCAATGTCATCTGACTCATTTTCTTCCAAGACACTGCCACTTCTCTCAAGTAGACAAGAATCAGAATCCAACATAGATACCGGCAACCCCATCGATTCAAGCCAAGTTGTCCACCATTATTGGAGAAGGTTCGACGACAGGTTCATGCGTCCGATGTTCGGAGGCAGAGGGTTTGTACCTGTCGTTCCAAGTTCACCTACAGAAGATAGCAGTCTACATTAG 1575 0.4298 MMALNSSLGVMKLELFSSSPDSASVDSITLFVLLLCACVLIGHLLEKSRWMTESVVALIIGLFTGTIILMTTRGKSSHILVFDEELFFIYLLPPIIFNAGFQVKKKQFFRNFLAIILYGVIGSLISFLIVSLGSLQLFKTLDLDLMELADYFALGAVFSATDSVCTLQVLNQEETPLLYSLVFGEGVVNDATSVVLFNAIQKFDLSHITSVNVMQFIGNFFYLFLTSTFLGVAVGLLSAYIIKKLYFGRHSTDREIALMILMAYFSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRITSRHAFATFSFVSEIFIFLYVGMDALDMEKWRFASNSPWTLLGACGILLCLVLLGRAAFVFPLSFIANLFRKSKADKIAFKQQFVIWWAGLMRGAVSIALAYNKFTRKGHTQLQGNAIMITSTITVVLFTNVVGGLLTKPLIRSLLGGNSMSSDSFSSKTLPLLSSRQESESNIDTGNPIDSSQVVHHYWRRFDDRFMRPMFGGRGFVPVVPSSPTEDSSLH* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2571 524 Pfam Sodium/hydrogen exchanger family 32 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ahy12g2571 524 PRINTS Na+/H+ exchanger signature 100 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ahy12g2571 524 PRINTS Na+/H+ exchanger signature 115 123 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ahy12g2571 524 PRINTS Na+/H+ exchanger signature 155 165 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ahy12g2571 524 PRINTS Na+/H+ exchanger signature 86 97 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Ahy12g2571 524 PANTHER SODIUM/HYDROGEN EXCHANGER 10 520 IPR018422 GO:0006812|GO:0015299|GO:0016021
Ahy12g2571 524 PANTHER SODIUM/HYDROGEN EXCHANGER 10 520 - -
Ahy12g2571 524 Gene3D - 25 448 IPR038770 -
Ahy12g2571 524 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 27 447 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2571 Ahy-Chr12 115039836 115045487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2571 18 522 Antiporters AT3G05030 67.681 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2571 - K14724 qsu:112020558 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2571 12 115039836 115045487 Ahy12g2571 12 115039836 115045487 ECH