Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2552 ATGAAGGAAAAAGTGGATTCACCAGTTACAGTTCTTGAGGACTATTTCAGGTCCTCAGATTCATCAGAAACAAGTTGTTCAAAAGATCATGATCATAGTGGTTTGGATTCTGAGTCTCAAGAAATTTCAAGGCCAAGTTGTTCAAGGTGGCATTCGTTTGTTCAAATTTTGAAGGGAAAATCATCATCCAAGAACAACACATTGTTGCACCCTTTGAACATATCAAGAAGAATGAGTAGTAGCATGAGAGAGTCTCTATGGCCAAGTTGCCTCTTAGATGTTGCAAGCCCTTCACCTTGTAGGTCACCTTGGAAGATCTTCTCTCACCATGATATTCAACTAGCAACCAATCATTTCAGCCAAGAAAACTTGATTGGAAAAGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTACCAAATAATCAGGTTGTAGCAATTAAGAGGCTAACAAGAGGAACTGCTGATGAGATCATAGGTGACTTTTTATCAGAACTTGGAGTTATGGCACATGTCAATCACCCCAACACTGCTAAGCTTGTTGGTTATGGTGTGGATGGTGGAATGCACCTTGTTCTTGAATTGTCTGAGAAAGGGAGCTTAGCTTCACTGCTTTATGGTTCGAAGGAGAAATTAGCATGGTGCATGAGGCAAAAAATTGCAGTAGGAACAGCAAAGGGTATATTATATCTTCATGAGGGTTGTCAAAGAAGAATAATTCATAGAGATATAAAAGCTGCAAATATATTGCTCACTGAGGACTATGAGCCTCAGATATGTGATTTTGGGCTAGCAAAATGGCTACCGCAGAATTGGACTCACCACACTGTTTCGAAATTTGAAGGAACTTTTGGGTACCTTGCACCTGAGTACTTGCTTCATGGAATTGTTGATGAGAAAACAGATGTATTTGCTTTTGGTGTGCTTCTATTAGAATTGGTCAGTGGAAGGCGTGCACTTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCATTGCTGAGAAAGAATGAAATTAAGGAGCTGATTGATCCATCACTAGATGAAGAATTTGACACAAGGGAGTTGAATCTCATGTTATTGGCAGCTTCTTTGTGCATTCAACAATCTTCAATTCGTCGCCCCTCTATCAGACAGGTTGTTCAACTTTTAAATGGAAATCTCAGCTGCTTTAAGGGCATGAAGAAAACTAGATTTCCATTCTTCAGAAAAGTCTTCCAAGAAGAACTCCTTGATTCTGAATAA 1245 0.3944 MKEKVDSPVTVLEDYFRSSDSSETSCSKDHDHSGLDSESQEISRPSCSRWHSFVQILKGKSSSKNNTLLHPLNISRRMSSSMRESLWPSCLLDVASPSPCRSPWKIFSHHDIQLATNHFSQENLIGKGGYAEVYKGCLPNNQVVAIKRLTRGTADEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMHLVLELSEKGSLASLLYGSKEKLAWCMRQKIAVGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQICDFGLAKWLPQNWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLRKNEIKELIDPSLDEEFDTRELNLMLLAASLCIQQSSIRRPSIRQVVQLLNGNLSCFKGMKKTRFPFFRKVFQEELLDSE* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2552 414 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 413 - -
Ahy12g2552 414 MobiDBLite consensus disorder prediction 16 40 - -
Ahy12g2552 414 SMART serkin_6 119 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2552 414 ProSitePatterns Protein kinases ATP-binding region signature. 125 147 IPR017441 GO:0005524
Ahy12g2552 414 Pfam Protein kinase domain 120 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2552 414 Gene3D Transferase(Phosphotransferase) domain 1 196 397 - -
Ahy12g2552 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Ahy12g2552 414 SUPERFAMILY Protein kinase-like (PK-like) 96 384 IPR011009 -
Ahy12g2552 414 PANTHER OS08G0249100 PROTEIN 1 413 - -
Ahy12g2552 414 MobiDBLite consensus disorder prediction 23 38 - -
Ahy12g2552 414 ProSiteProfiles Protein kinase domain profile. 119 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2552 414 Gene3D Phosphorylase Kinase; domain 1 93 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2552 Ahy-Chr12 114742050 114748046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2552 106 380 Trihelix Transcription Factor Family AT1G68690 41.958 3.34e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy12g2552 Pkinase 9.30E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2552 - - gmx:100780587 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2552 12 114742050 114748046 Ahy16g0999 16 18050486 18057163 ECH
Ahy12g2552 12 114742050 114748046 Ahy12g2552 12 114742050 114748046 ECH
Ahy16g0288 16 6266527 6268338 Ahy12g2552 12 114742050 114748046 ECH
Ahy11g2492 11 140507164 140509957 Ahy12g2552 12 114742050 114748046 ECH
Ahy14g0360 14 4890919 4893804 Ahy12g2552 12 114742050 114748046 ECH
Ahy12g2552 12 114742050 114748046 Ahy2g2215 2 98044195 98048532 hybridization
Ahy16g0288 16 6266527 6268338 Ahy12g2552 12 114742050 114748046 PCT
Ahy6g1036 6 13762641 13765221 Ahy12g2552 12 114742050 114748046 PCT
Ahy12g2552 12 114742050 114748046 Ahy16g0288 16 6266527 6268338 PCT
Ahy12g2552 12 114742050 114748046 Ahy6g1036 6 13762641 13765221 PCT