Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2550 ATGACCATTTTACCCCTCTTCCTTTTCTTCTTCTTTCTCCCACTACCATCCCTCTCCCAACAACCGCCACCACCACCACCACCCTCATCATCATCATGCCCTCTTAACTTCACCATCCTCTACACCCTCACCGGCACCGGAAACACCCCAACCTCTTACTCCGCCGCCTCCGGAACCACGGTCACAAACACCAAGTGCCAGTTCATCCGCCAATCCTTCCGCCTCCTCCAGTCCGACCTCCTCCGCCGCACCGACAACTTCATGCCACCCCTCTCCGCCTCCGTCTCGTGCTGGTCCAACTTCCAATCCTACATCAACTCCTTCGACCCCACCTTCCATATTCAATCCTCATGCGGATTCTCCAACGCTTCAATTTCCCAAGGTTGCGTCAACATCACCACAAGGCAACGCTTTGAATCGTTGGTATCCTCTTCCGTGCTTCAAAATGTGGATACTAGTTGTAACCAGTCCCTTGAGAATAACTCGCCATGCGCACTCTGCACTACAAGCTTGTCTTCTTTACCAGCTTCTGGTAAATATCTTGGGAACCTCAGTGATTGCACTTCTCTGCCTTCTGTTTATGCTGCTGCTTTTAGCAACGCTTTTGGCCCTTCTGACCCTGGCACTGCAAAGTGCTTGTTCTCCCTTGATTTCACGCCTTTCGGCGATTCTAACAACAAGAAGAACAAGAAGAAGATTGTTGTTTCTGTCGTTGTCACCTTTATTTCTGTTTCGGGTTTGGTTTTCGTGGCTTTGGGATTGTGGAAGTTGAATGAAAAGTTGAGTGGTAAAAATGTTAGTGTTGCTGAAATGGGTTTGGTTTCTTCTTCAAGTGTTATGTGTTTGGATTATTCTTCTATGGATCAGAGCACTACTTTGATAAGATTCAGTATTGAGGATATTAAGAAAGCTACTAAGAATTTCTCAAGAGATAACATAATTGGAAGAGGAGGTTATGGCAACGTTTACAAAGGGTTGCTAAATGATGGAACTGAGGTTGCATTGAAGAGGTTCAAGAACTGTTCTGCTGCTGGTGATTCCAGCTTCAAGCATGAGGTTGAGGTTATTGCAAGTGTTAGACATGTGAATCTTGTTGCATTAAGAGGATATTGCAGTGCCACAACAAATTTAGAAGGGTACCAAAGAATCATTGTTTGTGATTTAATGAAAAATGGTAGCCTTCATGACCATTTATTTGGCGGCGGTTCTTCTTCAATTGGGCTTAATAATAAGCTTAGTTGGCCAATTAGGCAAAAGATTGCACTAGGAACTGCTAGAGGAATTGCTTATTTGCATTATGGTGCTCAACCTTCCATAATTCATAGAGATATCAAAGCAAGTAACATTCTTTTAGACGAAAAATTCGAGGCTAAGGTAGCCGATTTCGGTCTTGCAAAGTTTAATCCTGAAGGTATGACACATATGAGCACAAGGGTAGCAGGAACAATGGGTTATGTGGCTCCGGAATATGCTTTGTATGGTCAATTAACAGAGAGAAGTGATGTTTTCAGCTTTGGTGTTGTGCTTCTTGAGCTTCTAAGTGGAAAAAAAGCACTTTCAATGAGCAATGACGGTCAACCTTCTGCGTTGACCGATTGGGCATGGTCAATGGTTAGATCAAACAAGGCCTTAGATGTGATTGAAGATGGAATGCCTGAACTTGGGTCACCCAAGATTCTTGAGAAATATGTTTTGATTGGTGTGCTCTGTTCTCATCCTCAATTGTATGCTAGGCCTACTATGGATCAAGTTGTTAAGATGATGGAAACGGATCAAGATGTTGAAGATAATGAGGAGAACATGGTGCCGGCTATACCGGATCGGCCGATCCCTCTGGTGGCCGGAAGGCTTGATATCGAGAGATCGGCCAGTAGTAGTGGCGGCGGCGGCGGCTCTGGTGGACTATCTAGTCCTACAGGGTACCAAGCTTATACAATTGGAAGTGATAAGCATTCTTCTAATAACTCTAAGGAAGATGGAAGTTCAAGCTCCAAGATTTTGAGTATAGAAGAATGA 2016 0.4435 MTILPLFLFFFFLPLPSLSQQPPPPPPPSSSSCPLNFTILYTLTGTGNTPTSYSAASGTTVTNTKCQFIRQSFRLLQSDLLRRTDNFMPPLSASVSCWSNFQSYINSFDPTFHIQSSCGFSNASISQGCVNITTRQRFESLVSSSVLQNVDTSCNQSLENNSPCALCTTSLSSLPASGKYLGNLSDCTSLPSVYAAAFSNAFGPSDPGTAKCLFSLDFTPFGDSNNKKNKKKIVVSVVVTFISVSGLVFVALGLWKLNEKLSGKNVSVAEMGLVSSSSVMCLDYSSMDQSTTLIRFSIEDIKKATKNFSRDNIIGRGGYGNVYKGLLNDGTEVALKRFKNCSAAGDSSFKHEVEVIASVRHVNLVALRGYCSATTNLEGYQRIIVCDLMKNGSLHDHLFGGGSSSIGLNNKLSWPIRQKIALGTARGIAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALSMSNDGQPSALTDWAWSMVRSNKALDVIEDGMPELGSPKILEKYVLIGVLCSHPQLYARPTMDQVVKMMETDQDVEDNEENMVPAIPDRPIPLVAGRLDIERSASSSGGGGGSGGLSSPTGYQAYTIGSDKHSSNNSKEDGSSSSKILSIEE* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2550 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Ahy12g2550 671 Pfam Protein kinase domain 309 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2550 671 SMART serkin_6 308 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2550 671 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Ahy12g2550 671 MobiDBLite consensus disorder prediction 625 671 - -
Ahy12g2550 671 SUPERFAMILY Protein kinase-like (PK-like) 287 589 IPR011009 -
Ahy12g2550 671 ProSiteProfiles Protein kinase domain profile. 308 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2550 671 Gene3D Transferase(Phosphotransferase) domain 1 389 605 - -
Ahy12g2550 671 Gene3D Phosphorylase Kinase; domain 1 274 387 - -
Ahy12g2550 671 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 30 653 - -
Ahy12g2550 671 MobiDBLite consensus disorder prediction 620 671 - -
Ahy12g2550 671 Pfam SPARK 29 176 IPR043891 -
Ahy12g2550 671 CDD STKc_IRAK 314 589 - -
Ahy12g2550 671 PANTHER OS01G0253100 PROTEIN 30 653 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2550 Ahy-Chr12 114647360 114649837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2550 30 656 Receptor kinase-like Gene Family AT2G48010 59.874 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Ahy12g2550 Pkinase 1.50E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2550 - - gmx:100800760 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2550 12 114647360 114649837 Ahy12g2550 12 114647360 114649837 ECH
Ahy16g0287 16 6261276 6263635 Ahy12g2550 12 114647360 114649837 ECH
Ahy12g2550 12 114647360 114649837 Ahy2g2211 2 97993074 97997369 hybridization
Ahy6g1037 6 13767862 13770345 Ahy12g2550 12 114647360 114649837 PCT
Ahy12g2550 12 114647360 114649837 Ahy6g1037 6 13767862 13770345 PCT