Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2537 ATGGCATCTTCTTCTTTCAATGTTCCTTTAATCAAACATGATCTCTTCATAAGCTTTAGAGGAGAAATTCGCACTTCTTTTCTTTGCCATTTGATAAAAAGATTGCGCGATGACAGAATCATTAGTTTCTTTGTTGACGAGGAAAATCTTGGTGCTGGAGATGAGATCTCATCCGCACTTCTTCAAGCAATTGAGGAATCTTCCATTTCATTGGTCATCTTCTCGAAAGATTATGCTTCTTCGAGATGGTGTATGGAGGAGCTTGTGAAGATTATTGAATGCAAAGAACAATATCAAAGGACTCTGGTACCTGTTTTTTACAATGTTGATCCTTCTCATGTAAGGCACCAGAAACGAACTTTTGAAGAGGCTTTTGATGTCCACACTGAGAAGTATAGAGAAAACATGGCAAAGGTGCAGAATTGGAGATCTGCATTAAGAAAGGCTGCTGATTTGTCTGGAATCCATTATCCATCAACCTTCATCAGAAATGAAGTTGAGCTCATTGAAAAAATTATTGAAGTTGTGAATGAGAAGTTGCCGCCTATTTGTCCAAATAAATCCAAAGGTGTTGTTGGAATTGATGAACAAGTTAAGTCTATTGAATCGTTATTGGCAAAAATGGAGCCGAATGAAGTTGGAATCCTTGGAATTTGGGGCATGGGCGGTATAGGTAAAACAACCATTGCTCAAGTTATATTCAATAAATATTCCTCACAGTATGAAGGTTGTTGCTTCTTGAAAAATGTCAGAGAAGAATCAGAAAGGCACGGTCTGGATTATTTGTATGAGCAACTCTTTTCTCAACTACTGAAGAAACAAAATCTCCTTGTGAAAGGTTCTGCCAATGCAATATCTGCCATTTACGAGAGAAGATTGAGTCAGAAAGAAGTTCTCATAGTACTTGACGATGTGGATACATCAGATATATTAGATTATCTAACTGGAGAACAAACCTGCTTGGCACCAGGTAGTAGGGTCATTGTAACAACCAGAGACAAGCAGATACTCATTGCTGCAAGAGCACATAGAATATACGAGGTCAAGCGATTGAGCTTTAAGAGCTCCCTTGAGCTTTTTTGCATAAAAGCCTTTAACAAAAGCTATCCTGAAAATGGATATAAAAAGCTTTCACAAATGGCAGTTAATTATGCAAATGGCATTCCACTAGCCTTAAAAGTATTGGGTTCTTTTTTATGCTCAAAAAGTGCAGTAGTTTGGAAAAATGCACTAAAAAAACTCCAGAGTTGCCCTGATAAGAGGATTTTCAATGTGTTGAAATTGAGCTACGATGGATTAGATGATTCGGACAAGAGCATATTCCTTGACATTGCATACTTTTTCAAAGGAGAATGCAAAGATAATGTCACAAGATTTCTAGACTCATGTAGTTTCTATGCGGATGTTGGAATAGACAATCTTGAAAGTAAAGCTCTTATAACTATTTCCTACAATAGAATACAAATGCATGACTTGATACAGCAAATGGGTTGGGAAGTCGTTCGCCAAGAATCAAATAAAGATCCTACAGAGCTCACTCGAATAAATAAGCCTGAAGATTTTCACAATTTATTGAAAAATAGCAAAGTAAGAACACGGTACCTCCACTCATTTTGTTTTTACTTGTTTTGA 1632 0.3689 MASSSFNVPLIKHDLFISFRGEIRTSFLCHLIKRLRDDRIISFFVDEENLGAGDEISSALLQAIEESSISLVIFSKDYASSRWCMEELVKIIECKEQYQRTLVPVFYNVDPSHVRHQKRTFEEAFDVHTEKYRENMAKVQNWRSALRKAADLSGIHYPSTFIRNEVELIEKIIEVVNEKLPPICPNKSKGVVGIDEQVKSIESLLAKMEPNEVGILGIWGMGGIGKTTIAQVIFNKYSSQYEGCCFLKNVREESERHGLDYLYEQLFSQLLKKQNLLVKGSANAISAIYERRLSQKEVLIVLDDVDTSDILDYLTGEQTCLAPGSRVIVTTRDKQILIAARAHRIYEVKRLSFKSSLELFCIKAFNKSYPENGYKKLSQMAVNYANGIPLALKVLGSFLCSKSAVVWKNALKKLQSCPDKRIFNVLKLSYDGLDDSDKSIFLDIAYFFKGECKDNVTRFLDSCSFYADVGIDNLESKALITISYNRIQMHDLIQQMGWEVVRQESNKDPTELTRINKPEDFHNLLKNSKVRTRYLHSFCFYLF* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2537 543 SMART till_3 12 152 IPR000157 GO:0007165
Ahy12g2537 543 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 535 - -
Ahy12g2537 543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 444 IPR027417 -
Ahy12g2537 543 Pfam TIR domain 12 186 IPR000157 GO:0007165
Ahy12g2537 543 Pfam NB-ARC domain 197 420 IPR002182 GO:0043531
Ahy12g2537 543 Gene3D - 179 345 IPR027417 -
Ahy12g2537 543 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 535 IPR044974 GO:0006952
Ahy12g2537 543 SUPERFAMILY "Winged helix" DNA-binding domain 421 523 IPR036390 -
Ahy12g2537 543 Gene3D - 11 178 IPR035897 -
Ahy12g2537 543 PRINTS Disease resistance protein signature 385 399 - -
Ahy12g2537 543 PRINTS Disease resistance protein signature 292 306 - -
Ahy12g2537 543 PRINTS Disease resistance protein signature 215 230 - -
Ahy12g2537 543 ProSiteProfiles TIR domain profile. 11 180 IPR000157 GO:0007165
Ahy12g2537 543 Gene3D - 351 434 IPR042197 -
Ahy12g2537 543 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 154 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2537 Ahy-Chr12 114371970 114375537 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2537 61 515 WRKY Transcription Factor Family AT4G12020 32.237 2.87e-60 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2537 - - ahf:112728444 1063.52