Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2536 ATGATAGACTTGTCTCAAATTGGAGATCTACACTTCAATGCTGACACCTTTAAAAATATGCCTCAACTAAGGTTTCTTAAGTTTTATGCTCCATGGGATGAAAAACAGTTGAATGTGTACATTCCCATACCCCTGGAGCCGTTTTCTGCTAGACTCAAGTATTTGGAGTGGAATAGTTATCCTCTGAATTCTCTATCATCAATGTTCTGTGTGGAGCAGCTTGTTGAGCTTAGGATGCCAAACAGTCAAATTTCTAAACTTTGGGATGGAACGCAGGAACTTCCGAATTTGATAGTGCTTTACCTTTATGGATGTAAAAAGTTGGTAGAGCTTCCAGATTTCAGTAAAGCAACAAAGCTTAAAACGATAGATCTTTGGAATTGTGAAAAACTATGTCAACTTCATCCATCTATTTTATCCATCCAAACTCTTGAGGAATTATATCTTACTGGTTGCACAAAATTGAAGTGTGTCAAAAGCAATTTGAAGTCTCTTAAAACATTTTATGCTTATAATTGTTTAAGCCTGGAGAAATTTTCAGTGTCATCAGAAAAACTGTCGGATTTGGATATCTCTTTCTGGAGAATTAAAAGTCTACCAAATGAAATACGTAGCTTTTTTTCTCTTGAGTATCTTTGTCTTAGTAATTGCAGAAAGCTAATTGATCTCCCACGCAACATCAAAGCTCAATCAAGGTTAAGGGCTCTTGACGTAAGTGGTTGTAGTAGTCTTCGTGCTATACCAGAACTTCCACCATCTATTGAAGAGCTTTATGCTGTTGATTGCACATCACTTGAAACAATATTCAATTTGAAGGCAGTATTTAGTTTGAATAGGAGAAAGATCTCATTTGCAAATTGTGTGAGATTGGAACAAGAGTCAGTGAATGATATTATGGAAGATGCTCATCTCACAATATTCAGAAATGTTTTATTGTTGTCAGCAGATCCAGATCAGATGATAAATTATTATTATTATCATAAAATGTTAGGTTGTGTTTGTTATCCTGGGTACAAAGTTCCAAAGTGGTTCGGATGTGAAACAAGAGGAGCATCCATAATAATTGAACTTCATCAACCTTACTACGAGTTGTTGGGTTTCTTCTTCTGTTGTGTTATTTCTCAAAACTTACCTTCTTATTATTTTGAAGAATTGGATCTTGTCAATATCAAGTGTGAATACCGCCACTTCGGAGATGGCGTAAAGGACACATTTGTAAGTAAAAATCTAAACTTTGTTTCTAAACGACGATGTAGCTGTGATCATGTTTTAATATGGACTGATCCATTTGGTAGTGAAAACATATTGGGTGAAATTGAGAGGTGCAGACTCAGAGGTGGCAGTGATGATGATGATAGCACTTGCAACCAAAAGATGTCATTCAGATTCAGTATTGATAGACCTAAGAGAGGGAAGAGAGTCCAAATAAGGAGAGAAAATGATGAAGATTGTTTTATCAAAGGGTGTGGGGTTATTCCAATGTATGCCTCAACTCTCTTGGATGCCATTCAAAATCTTGAATTGGAGTTCAACTTGAAGCCTCATCATAACCCCATCCCAGGGATAAATCTGGACGAAGTAAAAAGTATGATGATCCGGAAGAGCAAAGGAAAATCAAAACTCCACTGA 1629 0.3634 MIDLSQIGDLHFNADTFKNMPQLRFLKFYAPWDEKQLNVYIPIPLEPFSARLKYLEWNSYPLNSLSSMFCVEQLVELRMPNSQISKLWDGTQELPNLIVLYLYGCKKLVELPDFSKATKLKTIDLWNCEKLCQLHPSILSIQTLEELYLTGCTKLKCVKSNLKSLKTFYAYNCLSLEKFSVSSEKLSDLDISFWRIKSLPNEIRSFFSLEYLCLSNCRKLIDLPRNIKAQSRLRALDVSGCSSLRAIPELPPSIEELYAVDCTSLETIFNLKAVFSLNRRKISFANCVRLEQESVNDIMEDAHLTIFRNVLLLSADPDQMINYYYYHKMLGCVCYPGYKVPKWFGCETRGASIIIELHQPYYELLGFFFCCVISQNLPSYYFEELDLVNIKCEYRHFGDGVKDTFVSKNLNFVSKRRCSCDHVLIWTDPFGSENILGEIERCRLRGGSDDDDSTCNQKMSFRFSIDRPKRGKRVQIRRENDEDCFIKGCGVIPMYASTLLDAIQNLELEFNLKPHHNPIPGINLDEVKSMMIRKSKGKSKLH* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2536 542 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 396 - -
Ahy12g2536 542 Gene3D Ribonuclease Inhibitor 164 301 IPR032675 -
Ahy12g2536 542 Gene3D Ribonuclease Inhibitor 2 163 IPR032675 -
Ahy12g2536 542 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 396 IPR044974 GO:0006952
Ahy12g2536 542 Pfam C-JID domain 336 495 IPR045344 -
Ahy12g2536 542 SUPERFAMILY L domain-like 1 283 - -
Ahy12g2536 542 Pfam Leucine Rich Repeat 73 92 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2536 Ahy-Chr12 114370679 114372418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2536 13 261 WRKY Transcription Factor Family AT4G12020 34.050 1.14e-28 119